Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0529 ATGAATTACCTGTATACAGTGAAAGAAGAATACTTGGAAGCACCTTCGTTTCAAACAGGAAGAGAACTAGCAATGGTTCCACCTCCACAGCCAATGGAGGGAATTCATGACATAGGACCACCACCATTCCTCACCAAGACGTTCGATGTGGTGGACGACCCAATGACCGACCACATAGTCTCGTGGAGCAGAGGCGGAACAAGCTTTGTCGTTTGGGATCCACATTCCTTCTCCACCAATCTCCTTCCTCGGTACTTCAAGCACAGCAACTTATCAAGCTTTGTCAGGCAATTAAACACTTACGGTTTTAGGAAAATTGATCCAGATAGATGGGAGTTTGCGAATGAAGGATTCCAGAGAGGGCAGAGGATTCTATTGAGGAACATAAGGAGAAGGAAGGCACCTTCTCAGGCAAGTTCTTCCTCACAAGCAATAGGTCATTATGCTGAAGTAGGCAGGTTTGGAGGAGATGAAGAAATAGGTCGTTTGAGACGTGACAAGCAAGTGTTAATGATGGAGCTTGTGAGGCTTAAGCAGCAGCAACAGAATACCACAGCCTACATTCAGGCGATGGAGGAGAGGTTAAAAGGCACAGAAGTGAAGCAGCAACAAATGATGGCTTTCTTAGCTAGAGCTATGAAAAACCCAGCTTTTCTTCACCAACTGCTCCAACAGAAGCAGGGGAAGGAGCTGGAAGAAGCCATGAGTAAAAAGAGGAGGAGGCCAATTGAGCAAGGACCGGGTGATGTTGCTGAATCAAGCAGTGAAGGGGGAAGGAATCCGGTCAAAGTTGAGGCCTTAGAATTTTGGAATGATGATTTTGGAGTGTCAGAGCTTGAAGTGCTTGCCATGGAAATGCAGGGCTTTGGCAGGGGGAGAAGAGAACAGGAACCACTAGAATCATCAGAGAGGCTGGATAAAGAACTTGATGAAGGGTTCTGGGAAGAACTGTTTAGTGAAGATTATGAGGGTGAATTAGATATTCCAAGCGACGAAGAAGAAGGTGAAGATGCGAATATCAATGACAAGTCCTAA 1035 0.458 MNYLYTVKEEYLEAPSFQTGRELAMVPPPQPMEGIHDIGPPPFLTKTFDVVDDPMTDHIVSWSRGGTSFVVWDPHSFSTNLLPRYFKHSNLSSFVRQLNTYGFRKIDPDRWEFANEGFQRGQRILLRNIRRRKAPSQASSSSQAIGHYAEVGRFGGDEEIGRLRRDKQVLMMELVRLKQQQQNTTAYIQAMEERLKGTEVKQQQMMAFLARAMKNPAFLHQLLQQKQGKELEEAMSKKRRRPIEQGPGDVAESSSEGGRNPVKVEALEFWNDDFGVSELEVLAMEMQGFGRGRREQEPLESSERLDKELDEGFWEELFSEDYEGELDIPSDEEEGEDANINDKS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0529 344 FunFam Heat shock transcription factor 1 36 133 - -
Bisa03g0529 344 MobiDBLite consensus disorder prediction 320 337 - -
Bisa03g0529 344 MobiDBLite consensus disorder prediction 320 344 - -
Bisa03g0529 344 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g0529 344 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g0529 344 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g0529 344 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g0529 344 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g0529 344 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 251 IPR027725 -
Bisa03g0529 344 Gene3D - 36 133 IPR036388 -
Bisa03g0529 344 Coils Coil 160 180 - -
Bisa03g0529 344 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Bisa03g0529 344 MobiDBLite consensus disorder prediction 229 246 - -
Bisa03g0529 344 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g0529 344 MobiDBLite consensus disorder prediction 229 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0529 Bisa-ChrBisa03 6681999 6683141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0529 29 325 HSF AT3G22830 51.479 7.88e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa03g0529 HSF_DNA-bind 1.5e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0529 03 6681999 6683141 Bisa07g0959 07 24542302 24543282 CCT