Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0516 ATGGCTGGGAAATCGAATTACTCCGTAGAAGTTGAGGACACTGTAATCGAAGAGAAGAGGTTAGATTCAAAGGCGAAGGAGGATAATGGAAGTTTTCGCAATCGAAAAATGTACATGAGAGCCGATAAGATTGATATCAAGAGTTGGGATATTCAACTGGAGAAGCACTTGAATAAGGTTCTGTCCAGAGAGGCGCAAAAGCAAAAGCGAAAGGAAGAGTGGGAAATTGATTCCTCCAAATTAGACCTAAGACATGTTGTAGATCACGGAACCTACGGGACTGTCTACCGTGGCGTATACGAAGGCCAAGATGTCGCAGTGAAAATATTTGATTGGGGCCAGAGTGCTACTGAAACAGCTGCTCTTCGAGCATCTTTTCTGCAAGAGGTTGCTGTTTGGCATAAGCTTAGCCATCCAAATATCACAAAGTTCGTGGGAGCTTCAATGGGAACGTCATATCTGAGAATTTCTTCAGAAGATATATCAAGTGAAGTTCAATCATCTGAAGTACAGGGCGCCTGTTGTGTTGCTGAGTATGTTCCTGGGAATCTAAAGAAGTACTTGATAAGGAATCGAAGGAAAAAACTTGCTTTCAAGGATGTGATTCAACTTGCTTTGGACCTCTCCAGAGGTTTGAGTTATCTTCACTCAAAAAGAATTGTGCATCGTGATGTGAAGACAGAAAATATGTTGTTGGACGCCCATAGAACCTTAAAACTTGCTGATTTTGGTGTTGCTCGAATTGAAGCTCACGACCCAAGGGACATGACCGGGGGAACCGGTACCCTCGGTTACATGGCGCCAGAGGTGGTTGATGGTAAGCCTTACAACAGGAAATGTGACGTATATAGTTTCGGTATCTGCTTGTGGGAGATCTATTGCTGCGACATGCCTTATTCTAATCTTGGCTTTTCTGATGTCTCCCCTGGAGTTGTTCAACGCAATCTACGACCAAAAATCCCAAGATGTTGTCCAAGCTCACTCGCAAGGATCATGCGAAGATGTTGGGATGGAAACCCAGACAAACGACCCGACATGGACGAAGTAGTGAGGTTGTTAGAGGCCATGGATACTAGTAAGGGAGGTGGTATGATTCCTGAAGACCAATCAACTGGGTCTGGGTTCTGGTGTTTCAGTATGGGCCGCGGCCCATAA 1155 0.4476 MAGKSNYSVEVEDTVIEEKRLDSKAKEDNGSFRNRKMYMRADKIDIKSWDIQLEKHLNKVLSREAQKQKRKEEWEIDSSKLDLRHVVDHGTYGTVYRGVYEGQDVAVKIFDWGQSATETAALRASFLQEVAVWHKLSHPNITKFVGASMGTSYLRISSEDISSEVQSSEVQGACCVAEYVPGNLKKYLIRNRRKKLAFKDVIQLALDLSRGLSYLHSKRIVHRDVKTENMLLDAHRTLKLADFGVARIEAHDPRDMTGGTGTLGYMAPEVVDGKPYNRKCDVYSFGICLWEIYCCDMPYSNLGFSDVSPGVVQRNLRPKIPRCCPSSLARIMRRCWDGNPDKRPDMDEVVRLLEAMDTSKGGGMIPEDQSTGSGFWCFSMGRGP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0516 384 Pfam Protein tyrosine and serine/threonine kinase 83 353 IPR001245 GO:0004672|GO:0006468
Bisa03g0516 384 ProSiteProfiles Protein kinase domain profile. 81 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g0516 384 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Bisa03g0516 384 PRINTS Tyrosine kinase catalytic domain signature 324 346 IPR001245 GO:0004672|GO:0006468
Bisa03g0516 384 PRINTS Tyrosine kinase catalytic domain signature 214 232 IPR001245 GO:0004672|GO:0006468
Bisa03g0516 384 SUPERFAMILY Protein kinase-like (PK-like) 63 353 IPR011009 -
Bisa03g0516 384 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 357 - -
Bisa03g0516 384 Gene3D Transferase(Phosphotransferase) domain 1 181 368 - -
Bisa03g0516 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Bisa03g0516 384 FunFam Kinase suppressor of Ras 1 70 161 - -
Bisa03g0516 384 Gene3D Phosphorylase Kinase; domain 1 69 159 - -
Bisa03g0516 384 CDD STKc_MAP3K-like 89 353 - -
Bisa03g0516 384 SMART serkin_6 81 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0516 Bisa-ChrBisa03 6477098 6478891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0516 18 384 MAP Kinase Kinase Kinase AT3G22750 66.841 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa03g0516 PK_Tyr_Ser-Thr 4.8e-56 CL0016