Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0496 ATGAGAGGGGCGCTGAGAAATGGGAAGCGATATGAGAGGCAGCAGAATGACGAGGTTCCTGGAAGGAGAGTAGTTCAGAATAAAGGAGATGACGTAAAACAAGAGGGTTCTGGTTTGAATGATGAGAGTTTAGCGCATGAAAGAGAGGCGTTAAACTTAACAATTGAGAATAAGGAATTGGAGCCACTCGTACCACAAGAATGTGGCTTAGATTTGGTTATGAGTAAGAGCGGAAATGTTGGGTTAACTGAGAATGAGTACAATAGGAGTAATTTAAGCTCTGATGCTGATATTGAAGGAGCTGACATTGAGTTGGGGCTTAAGAATAAGTATGATTCAAATGAGAAGATGCTGATTGGTGGTCAAGTATTGTGCCCGATGTCAAAGAAAGCCGACGATAAGATATCTGATAATAGAGAGCTATTAAACTTGACAATTGAGAATAAGGACGTGGAGTCAAATATACAGCAAGAATGTGATTTATACTGGGATATGAATAAGAGTGAAAATGTTGGGGTAGCTGAAAATAGGAACAAAATGAATACTTTAAGCTGTGATGATAACATTGAAGGAGTTGACATTGATATGGAGGTGAAGAGGAAAGTTGATTCAGATGATAAAATGCAGATTGGTGGGCGATTATTGCGCTCAATGTTAAAGAGAGCAGACAATAAGATCTTCACTGATGGAGAAATTGATGGGGTGTTGGTTGGGAAAAGTGGAGATCACGAACATGATCAGTTTGAGAAGAATAAGGTTATGGGAGAAAAGGAAGGCAATGATAGAAGGGAGTTGAAACGGAAGCGTGGGAGGCCCCCAAAATTTAAGATGGAAGAGCAAGATCAACTAGTTGGTGATATGCAATGGAATCGTGGAGGGCCCCCCAAATTGAAGAGGGAAGAGCAAGATCAACTAGTTGGCAGTATGCAACGGAAACGTGGAAGGCCCCCCAAATTGAAGACGGAAGAGCAAGATCAATTAGTTGGTAAAAAATTGCGACGGAAGTGTGGAAGACCCACTAAATTGAAGATAGAAGAGAAAGATAAATTAGTTGGTAAAAAATTGCGACGGAAGCGTGGAAGGCCCCCTAAATTGAAGATAGAAGAGCAGGATAAATTAGTTGGTAAAAAATTGCAACGGAAGCGTGGAAGGCCCCCTAAATTGAAGATAGAAGATCAAGATAAATTGAAGATAGAAGAGCAGGATAAATTAGTTGGTAAAAAATTGCGACGGAAGCGTGGAAGGCCTCCTAAGGCTGGGCAAAATCATAATCTTCTGAAAGTAGCACGCAATGGAAAAGGAAAGTTGGGCTTTCGAAAAGGTAAAAAAGGTTTAACTATGAGAGATGGTGTGACTTTGAATGCAATTGATGATATGTGCACGAAAGGGAAATCTTCTGTGGAAGAGCTAAAAAATAAGAGTGAATTTGGGAACCTTTTGAAAACTGAGAACAGTGAGGCAGCATCATCATTGACATCCAATTCTGTGAGTCCTCTTGTTCCTAATATAGGTGGAGTAAATAAAGTGAAGCAGGTAGTGAGGGAACACATTAAGGAGCTGCTCTTGGCTGCCGGCTGGACTGTTGACTATAGACCTAGGAATGGCAAGGTGTATAATGATGCAGTGTATATTAGTCCAGATGGAAGGACTCACTGGTCAATTACCTTGGCCTACAAAAGGCTTCAAGCACATTCTGAAGCTGGTGATGGTGAAGGTAAGGTATATAGGCCAGGTTTCAAATTTGCACCAATAACAAAAGAGGAGTTTAATATACTAACTAAGGTAATTATAAAGAGAAGGAAAAGTAAAGGGAAATTGAAGCAACTAGGAGAAAAAGGTGAAAATACAGTTAATGGAGTCAATAAAAATGTGAAGAAAGAAAAATTTGGATCTGTTGGAGGCTTCACTAAGTCAATGAAGGGTAAAATGAAGAGGAAATCATCACTTGTTGAGGAGGACAATCCAGATGTCATGTCACATAAAAGGTCTCGAGTTCTTGTCAAGGATCGGAAGCGACAGAAAACCCAAAACAAGAAGCGATGTGCTTTGTTGGTTCGCAATGCTGATGAGGAGGTAGATTCAGAAATTAATAGATATGTACCTTACAATGGAAAGCGAACTGTTCTTGCCTGGATGATTGATTTGGGAACAGTCCTGCAAAATGGGAAAGTTCATTATGTGAACCACAGAAGGAGAGGTCCTAAACTGGAGGGTAGGATAACAGGAGACGGAATTCATTGTGGCTGCTGTGATGAAATTGTAACAATATCAGAATTTGAAGCCCATGCGGGAAGCAGACTCTCTGATCCACTAAAAAATATATATACAGAGGGAGGAACTTCTCTTTTGCAGTGCCTGCTAGACTCATGGAATAAACAAGACGAATCTGAAAGAAAAGGTTTCCATTTCATTGGCACTACGAGTGAAGACCCTAATGATGACACATGTGGTGTCTGTGGAGATGGTGGAGACCTGATTTGTTGCGATGGTTGCCCATCAACATTCCATCAAAGTTGCCTAAATATTAGACACATAATGATTATGAGAAGCAACAAGGAAACATTCTTGTTAATGCTGAAACATAAAGCATCTGTTTGTCCTTGCAGAAGTTCCCATCTGGTGACTGGCACTGCATTTATTGCTCTTGCAAATTTTGTGGATCACATATCCTGCATTGAGGCAAATGGTGTGAAGGCTGATGACTCCTGTGGTACATTCTATTGTGGAAACAGATGTCAAGAGTTATCTGAGAGACTTGAAATGCTTCTTGGAGTTAAACATGACATTGAAGATGGATTTTCTTGGACTTTTGTTCGCCGGTCAGGTGTTGGCTCTAACGCTTCTCAGACAGAATCTCAGATGGTTGAATGTAATTCCAAGCTAGCTGTTGCATTATCTGTAATGGATGAGTGCTTCATGCCTTATATTGATCATAGAAGTGGAATTAATCTGATCCACAGTGTTCTTTATAACTGTGGGTCAAACTTCAGTCGCCTGAACTTCAGTGGTTTTATTACTGCAATTTTAGAGAGAGGTGATGAGGTCATCTCTGTTGCATCTATTAGGATCCGAGGGAACCAACTAGCAGAAATGCCATTTATTGGTACCCGCTATATGTACAGGCGGCAAGGAATGTGCCGCCGACTTTTAAGCGCTATTGAATCGAGAGAGATAGCAAAGTCTAAAGTTGCTGATGCAAATCTGATTTCTACAGAAGTTTCCAATCCTCAAGCCCAGAATAATCATAGTACACATGAGGAAGCAACTACATGTGATGAGGCGGGTTCAGTTGGGTCTGGTTTGATCATTTCTGCCGCACATGACATTGCTATTGAGACTATACATCACGATACAAGTCAAAAAGAAGTAAAATGTCAAGCGATTTATGATAATTTGACAGTGGAAGTCAAAACTATAGATACACGTGAGATGTGCAATCTTGATTGTGATCAGCCACATCCCATAGGATTAAAAGACATGAATTCTACATCTATCAATGGTTGTGGTCGTCAGTGTCGACCCAGTGTTGAATGTGTCTCTGGTGAAGTGAATTCTGAATCCATAAAAGTGGATCAATCAGACGGTTGTGCGTCCAAAGCAACCAATCTCCATACTCTTATACATTCTGGAGATGGGCAATCCATACAGGTAGCTTCAGGGTCCGGTGAGGATATTGCGAAGGGCGTAAATGAGAGAAGCAAAGCAACAGCTGATAGGAATTCAGATCTCAATGATAAACCTTGGATGAAGCAGTCTTCAGAGCAACATGAGCTTAATTTACAGGTTGATCAAACTGCAGAGAGTAATACCTACTCCTTATCTAGCCCAAACACCGCTTCCGGCGTGGCTCTTCACTGTGCATCAGCTGGTGGTACTTCATGTGGTAATAGCGAAGTAATAGTTCTTTCAAATCAAGCAAGTTGA 3924 0.4083 MRGALRNGKRYERQQNDEVPGRRVVQNKGDDVKQEGSGLNDESLAHEREALNLTIENKELEPLVPQECGLDLVMSKSGNVGLTENEYNRSNLSSDADIEGADIELGLKNKYDSNEKMLIGGQVLCPMSKKADDKISDNRELLNLTIENKDVESNIQQECDLYWDMNKSENVGVAENRNKMNTLSCDDNIEGVDIDMEVKRKVDSDDKMQIGGRLLRSMLKRADNKIFTDGEIDGVLVGKSGDHEHDQFEKNKVMGEKEGNDRRELKRKRGRPPKFKMEEQDQLVGDMQWNRGGPPKLKREEQDQLVGSMQRKRGRPPKLKTEEQDQLVGKKLRRKCGRPTKLKIEEKDKLVGKKLRRKRGRPPKLKIEEQDKLVGKKLQRKRGRPPKLKIEDQDKLKIEEQDKLVGKKLRRKRGRPPKAGQNHNLLKVARNGKGKLGFRKGKKGLTMRDGVTLNAIDDMCTKGKSSVEELKNKSEFGNLLKTENSEAASSLTSNSVSPLVPNIGGVNKVKQVVREHIKELLLAAGWTVDYRPRNGKVYNDAVYISPDGRTHWSITLAYKRLQAHSEAGDGEGKVYRPGFKFAPITKEEFNILTKVIIKRRKSKGKLKQLGEKGENTVNGVNKNVKKEKFGSVGGFTKSMKGKMKRKSSLVEEDNPDVMSHKRSRVLVKDRKRQKTQNKKRCALLVRNADEEVDSEINRYVPYNGKRTVLAWMIDLGTVLQNGKVHYVNHRRRGPKLEGRITGDGIHCGCCDEIVTISEFEAHAGSRLSDPLKNIYTEGGTSLLQCLLDSWNKQDESERKGFHFIGTTSEDPNDDTCGVCGDGGDLICCDGCPSTFHQSCLNIRHIMIMRSNKETFLLMLKHKASVCPCRSSHLVTGTAFIALANFVDHISCIEANGVKADDSCGTFYCGNRCQELSERLEMLLGVKHDIEDGFSWTFVRRSGVGSNASQTESQMVECNSKLAVALSVMDECFMPYIDHRSGINLIHSVLYNCGSNFSRLNFSGFITAILERGDEVISVASIRIRGNQLAEMPFIGTRYMYRRQGMCRRLLSAIESREIAKSKVADANLISTEVSNPQAQNNHSTHEEATTCDEAGSVGSGLIISAAHDIAIETIHHDTSQKEVKCQAIYDNLTVEVKTIDTREMCNLDCDQPHPIGLKDMNSTSINGCGRQCRPSVECVSGEVNSESIKVDQSDGCASKATNLHTLIHSGDGQSIQVASGSGEDIAKGVNERSKATADRNSDLNDKPWMKQSSEQHELNLQVDQTAESNTYSLSSPNTASGVALHCASAGGTSCGNSEVIVLSNQAS 1307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 644 660 - -
Bisa03g0496 1307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 805 883 IPR013083 -
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 1228 1254 - -
Bisa03g0496 1307 PRINTS AT-hook-like domain signature 354 364 IPR017956 GO:0003677
Bisa03g0496 1307 PRINTS AT-hook-like domain signature 266 276 IPR017956 GO:0003677
Bisa03g0496 1307 PRINTS AT-hook-like domain signature 308 319 IPR017956 GO:0003677
Bisa03g0496 1307 SMART PHD_3 815 869 IPR001965 -
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 238 341 - -
Bisa03g0496 1307 Pfam Tify domain binding domain 738 787 IPR032308 -
Bisa03g0496 1307 PANTHER PHD FINGER PROTEIN 12 489 1065 IPR042163 GO:0003714|GO:0045892
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 1228 1252 - -
Bisa03g0496 1307 SMART AT_hook_2 379 391 IPR017956 GO:0003677
Bisa03g0496 1307 SMART AT_hook_2 356 368 IPR017956 GO:0003677
Bisa03g0496 1307 SMART AT_hook_2 410 422 IPR017956 GO:0003677
Bisa03g0496 1307 SMART AT_hook_2 310 322 IPR017956 GO:0003677
Bisa03g0496 1307 SMART AT_hook_2 266 278 IPR017956 GO:0003677
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 1 43 - -
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 315 332 - -
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 293 308 - -
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 635 660 - -
Bisa03g0496 1307 SUPERFAMILY FYVE/PHD zinc finger 808 846 IPR011011 -
Bisa03g0496 1307 MobiDBLite consensus disorder prediction 238 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0496 Bisa-ChrBisa03 6325186 6334621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0496 265 1055 PHD Transcription Factor Family AT5G36670 38.021 8.61e-162 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0496 03 6325186 6334621 Bisa07g1867 07 45553476 45563091 CCT
Bisa03g0496 03 6325186 6334621 Bisa03g0496 03 6325186 6334621 ECH