Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0464 ATGAGTGACCTCCGAAACATGTTACAAGCTGCAGTTCAGTCGGTGCAGTGGACTTATAGCCTCTTCTGGCAACTCTGTCCTCAACAACGGATTCTGGTATGGGGTGATGGGTACTACAATGGACCAATCAAGACAAGGAAGACGATGCAGCCAATGGAGGATAGTTCAGAGAAGGCGTCTCTTCAGAGAAGCCGACAGCTGAGAGAGCTGTATGACTCGTTGTCGGCAGGAGACACCAACCCACCGGCCCGCCGCCCTTCCGCCGCCTTGTCTCCGGAGGACCTCACGGAATTCGAGTGGTTCTATTTGATGTGCGTCTCTTTCACATTTCCCGCTGGTGTCGGGTTACCAGGAAAGGCATATGGGAGGAAGCACCATGTATGGCTGGTTGGTGCCAACGAAGCAGATAGCAAAACATTTGCCAGAGCTATTCTTGCCAAGAGTGCTCGCATACAGACGGTGGTGTGCATTCCTCTATTGGACGGCGTCGTTGAACTTGGCACAACGGAGAAGGTTGAAGAAGACCTTCAATTCATCCAACATGTGAAGAGGTTCTTCACAAAGGACCACCGGCAGCACCCTCCACAGCCAAAGCCCGCCCTCTCCGGCCACTCCACCTCCAATGCCATCCCTCCCATCCCCGCCCCTCCTCTCCATCCCAACCAGCACCACTCGGACAAAGGTTATGATGACGACAACAATAACGACGAAGAAGTAGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGGAGACTCGGAGTCGGAGGTTGAGGCAGACATAGTCCAAAACAACGACCCAACATCGACAGCCAACGGTTCAGGCATGGGCGGCGAACCAAGTGAACTAATGCAGGTGGAGATGTCGGAGGATATACGGGTCGGATCACCCGATGACGCCTCCAACAACCTCGATTCCGATTTCCATCTGCTATCGTCCGCCCGCAGGTTGGATGCTTCTTCCCTTCAACCATCACCTTCAGTTGAGGCTACACCTGTAGGAGAAGACAATAATAATACAGGGGAAGACAATCACTACTCCCAGACGGTGTCGACGGTGTTACATAATCAGGCGAGGTCGTGGCTCGAAACTACCTCCACCACCTACACCACTTACTCCACCCAATCCGCTTTTGCCAAGTGGAACAGCCGAGCTCACCATCATCTCCGCCTCGCTCTGCAAGGGACCTCTCAGTGGGTGCTCAAGTACGTTATGTTCACCGTTCCACTCCTCCACGCCAATAATTCACCCTCAGCCACAGACGACGTCGTTGCCGCCAAGTTGCGCGGCAAGGGAACGCCGCAAGATGAGCTTAGTGCCAATCACGTGCTGGCTGAGCGCCGCCGCCGTGAGAAACTCAACGAGAGGTTCATTATACTGAGGTCGCTCGTCCCGTTCGTCACCAAGATGGACAAGGCCTCCATATTAGGGGACACCATCGAGTACGTGAAGCAGCTATGCAAGAAGATTCAGGATTTGGAGTCGGATCAACGGTCTAGATCGTTGGAGCTCCAAAGGGCAGAACAAGAACAAACAAGGAGCGGGGGATCGACGGCGGTGGACCGGAGTCGGGATGGGCCGGAGAAGAAGACAAAGAAGATGAGGATGGGAGAGGGGGCGACGAAAACGAAAAATGTGGAGCTGGTGACGTCGGTGCAGGTGTCGATCATAGAGAGCGACGCATTGTTGGAGCTGGAATGCGAGTACAGGGAGGGGTTGTTGTTGGATGTGATGGAAATGCTGAGAGAGAAGAAGATAGAGGTGAGGGGAGTGCAGTCGTCGGTGAACGGTGGGGTGTTTGTGGCGGAGTTGAGGGCCAAGGTGATGGAGAATCAAAAGGGAAGGAGGGCCAGCATTGTGGAAGTCAAGAGAGCACTCAATCAGATTATACCCCATTCTGACTATTAA 1917 0.5368 MSDLRNMLQAAVQSVQWTYSLFWQLCPQQRILVWGDGYYNGPIKTRKTMQPMEDSSEKASLQRSRQLRELYDSLSAGDTNPPARRPSAALSPEDLTEFEWFYLMCVSFTFPAGVGLPGKAYGRKHHVWLVGANEADSKTFARAILAKSARIQTVVCIPLLDGVVELGTTEKVEEDLQFIQHVKRFFTKDHRQHPPQPKPALSGHSTSNAIPPIPAPPLHPNQHHSDKGYDDDNNNDEEVEEEEEEEEEEEEEEGDSESEVEADIVQNNDPTSTANGSGMGGEPSELMQVEMSEDIRVGSPDDASNNLDSDFHLLSSARRLDASSLQPSPSVEATPVGEDNNNTGEDNHYSQTVSTVLHNQARSWLETTSTTYTTYSTQSAFAKWNSRAHHHLRLALQGTSQWVLKYVMFTVPLLHANNSPSATDDVVAAKLRGKGTPQDELSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLCKKIQDLESDQRSRSLELQRAEQEQTRSGGSTAVDRSRDGPEKKTKKMRMGEGATKTKNVELVTSVQVSIIESDALLELECEYREGLLLDVMEMLREKKIEVRGVQSSVNGGVFVAELRAKVMENQKGRRASIVEVKRALNQIIPHSDY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0464 638 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 442 508 IPR036638 GO:0046983
Bisa03g0464 638 MobiDBLite consensus disorder prediction 188 284 - -
Bisa03g0464 638 MobiDBLite consensus disorder prediction 232 262 - -
Bisa03g0464 638 Gene3D - 438 500 IPR036638 GO:0046983
Bisa03g0464 638 Pfam Helix-loop-helix DNA-binding domain 443 489 IPR011598 GO:0046983
Bisa03g0464 638 MobiDBLite consensus disorder prediction 321 348 - -
Bisa03g0464 638 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 4 186 IPR025610 -
Bisa03g0464 638 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 440 489 IPR011598 GO:0046983
Bisa03g0464 638 Coils Coil 493 513 - -
Bisa03g0464 638 MobiDBLite consensus disorder prediction 525 543 - -
Bisa03g0464 638 Coils Coil 229 259 - -
Bisa03g0464 638 MobiDBLite consensus disorder prediction 263 279 - -
Bisa03g0464 638 PANTHER TRANSCRIPTION FACTOR TT8 3 635 - -
Bisa03g0464 638 SMART finulus 446 495 IPR011598 GO:0046983
Bisa03g0464 638 MobiDBLite consensus disorder prediction 504 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0464 Bisa-ChrBisa03 5827646 5833562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0464 296 635 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 41.329 1.75e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g0464 bHLH-MYC_N 1.3e-51 CL0161