Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0451 ATGATGATGTCGTTTAACTCTGGAGGAACTAGCAACCATGTGTGTCGTTCAGCTGAGGATGTTACTCCAGCTAATGGAAGGAATGGGAATGGGAGGCAATGGACTTGTCTTCCTGAACCATTTCATAATTATATTGAGTATCTCACGGAATCCTCAACTTATCTGCCAATTACTACAACTCAATATGTGCTTGGGAGCTGTTATCCTTCTATTGACAGCTCACACGACGTTAATGGGGTCAATGGAACAGACAGAAACTTGTTTTACAGTATCGATCCAGGAAAAGCTTGCGGTTTTAAACCCACCGATGCTTCCACTGACGTAGAATTTAGGAAGGTGAAGACTGAAGACTTTGAACAGAAAATTATTAATTCAAGTAAATCTAATGGAGATATTGCCTTCCAGCACGTGGGGTATAGGAGGTCAGATAATGAAGGCTATCAAGCGAAGAAATTTGCAACTAACCAACATTATCTTCATGCTGAGAGTCAAGCTTCGTGGAAAACAGAATCAACTGGAGATAAACATTCTGTTTCACAACTTGATCCACGCTTACCAGTTGGAGCACCTGGTCTCCTTCTCAAACCAAAAACTAGTTCATCAAAACAGAAAGCTAGTGCCACTGACCGTCAACGCAGGCAACGTATTGCTGATAACCTTAAAGCCTTGCACGACTTGCTACCAACTCCAGCAGAGGGTAGTCAAGCATATATACTGGATGATATCATCGACTATGTCAAATATTTGCAGCTTCAGATTAAGGAATTAAGTGGAAGCAGATTGCGAGGAGAATCAACTGCCAATGCTATGCCCCTCACTTTCCGAGAGGGTTATGGCCATTATATTAACCAACAGATGCTGAATGAACCTCTGGAGGAGATGATGGGAAAACTACTTGAGGAACATCCAGCAGCAGCAGCTCAGCTTTTAGAGAGTAAGGGCCTTTTTCTGCTGCCTATGTCTCTGGTTGAAGACGTACGCCAAGCAATGCAGATTTTTGGCGGGATTCCTCGAGCTGTACCAAGATTTTCATCTCCAGTCTACTATACTATGTTTAGCTTTACTGATGCCAAGAGTGCTCTATTCTTCAATCTCACAAGCTTCATTGAATTGCCTTTAGAGCACTGCTATTAA 1134 0.4242 MMMSFNSGGTSNHVCRSAEDVTPANGRNGNGRQWTCLPEPFHNYIEYLTESSTYLPITTTQYVLGSCYPSIDSSHDVNGVNGTDRNLFYSIDPGKACGFKPTDASTDVEFRKVKTEDFEQKIINSSKSNGDIAFQHVGYRRSDNEGYQAKKFATNQHYLHAESQASWKTESTGDKHSVSQLDPRLPVGAPGLLLKPKTSSSKQKASATDRQRRQRIADNLKALHDLLPTPAEGSQAYILDDIIDYVKYLQLQIKELSGSRLRGESTANAMPLTFREGYGHYINQQMLNEPLEEMMGKLLEEHPAAAAQLLESKGLFLLPMSLVEDVRQAMQIFGGIPRAVPRFSSPVYYTMFSFTDAKSALFFNLTSFIELPLEHCY 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0451 377 SMART finulus 206 255 IPR011598 GO:0046983
Bisa03g0451 377 MobiDBLite consensus disorder prediction 164 178 - -
Bisa03g0451 377 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 260 IPR036638 GO:0046983
Bisa03g0451 377 CDD bHLH_AtbHLH_like 206 257 IPR045239 -
Bisa03g0451 377 MobiDBLite consensus disorder prediction 164 212 - -
Bisa03g0451 377 Pfam Helix-loop-helix DNA-binding domain 202 250 IPR011598 GO:0046983
Bisa03g0451 377 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 130 322 - -
Bisa03g0451 377 Gene3D - 198 269 IPR036638 GO:0046983
Bisa03g0451 377 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0451 Bisa-ChrBisa03 5630931 5633849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0451 195 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.007 6.23e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g0451 HLH 3.6e-07 No_clan