Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0448 ATGACCATCTCAATGGTAATGTGCAGACTAACACAACCACTAACAAATATTTCTTCCGCTAGCCCAAAAATAAACGTGACCACTCTTCCACGCCAGAAGGAGAAGGTAGTGTTGGTCATGGGAGCCACCGGGGCCGGAAAGTCCAGGCTGTCCATCGACCTCGCCACACGTTTTCCGGCGGAGATCATCAACTCCGACAAAATGCAAGTCTACGAAGGGCTCGACATAGTCACGAACAAGATCACCAAGGAAGAGCAGCGCGAGGTGCCGCACCATTTGCTAGGAACACAGAATCCGAACTCGCAATTCACAGCGACTAATTTCTGTGACACGGCTTCCCTCGCCATCGAGACAATCACCGGTCGCGGAAAGCTCCCGATCATCGTCGGAGGCTCCAATTCATACCTCGAGGGTCTGATCGACGACGACGACTATAAATTCCGATCGAGGTACGATTTCTTTTGTCTCTGGGTGGACGTTTCGATGCCCGTTCTTCAATCGTACGTAGCAGAGCGGGTCGATCAGATGTTCGAGAACGGAATGGTGAACGAGTTGAGACCATTTTTCAATCCAAACGGGGATTACTCGCGAGGGATTAGAAAAGCAATTGGAGTTCCGGAATTCGATAAGTATTTTCGGAGTGAAGCGTTCGCGGACGAAGAAACGAGGCAGCGGCTGTTGGAAGAGGCGATAAGCGAAATGAAGGAGAACACGTGGAAATTGGCGGGAAAACAGTTGGGGAAAATTCAGAGACTGAGGAACGTGAAGAGATGGAGGATTCAGCGCCTGGATGCGACTCCGGTGTTTCGGAGGCGTGGGGAAAAAGAAGAGGCGAAAGAGGCGTGGAGGAGAGTGGTGGCAGAGCCGAGCACGGCGATGGTGGCTCAGTTTCTTCGCAACCTCGCTACGAGCAGTGCCAATATGGGTTATGTGTCTGGTGGGCTCAGATTGGCGTCCCTCGAGAGTGCTATTGCTTCTTCCGGTCATCTCCAACCTATGGGGGCACACTCGTGCCCTGTGTGA 1023 0.5239 MTISMVMCRLTQPLTNISSASPKINVTTLPRQKEKVVLVMGATGAGKSRLSIDLATRFPAEIINSDKMQVYEGLDIVTNKITKEEQREVPHHLLGTQNPNSQFTATNFCDTASLAIETITGRGKLPIIVGGSNSYLEGLIDDDDYKFRSRYDFFCLWVDVSMPVLQSYVAERVDQMFENGMVNELRPFFNPNGDYSRGIRKAIGVPEFDKYFRSEAFADEETRQRLLEEAISEMKENTWKLAGKQLGKIQRLRNVKRWRIQRLDATPVFRRRGEKEEAKEAWRRVVAEPSTAMVAQFLRNLATSSANMGYVSGGLRLASLESAIASSGHLQPMGAHSCPV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0448 340 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Bisa03g0448 340 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 298 IPR039657 -
Bisa03g0448 340 Gene3D - 33 298 IPR027417 -
Bisa03g0448 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 144 IPR027417 -
Bisa03g0448 340 Coils Coil 217 237 - -
Bisa03g0448 340 Pfam IPP transferase 148 246 - -
Bisa03g0448 340 Pfam IPP transferase 69 142 - -
Bisa03g0448 340 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0448 Bisa-ChrBisa03 5605796 5606818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0448 149 298 C2H2 Transcription Factor Family AT2G27760 29.944 4.02e-19 86.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0448 03 5605796 5606818 Bisa07g1832 07 45006992 45007960 CCT
Bisa03g0448 03 5605796 5606818 Bisa03g0448 03 5605796 5606818 ECH