Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0434 ATGGACGGTGAAGCAGACCCTCCTAAAACGCCAACCAAAAGGCACAAGTGCTCGGCATGCTATAGGCAATATAAGAAAAAGGAGCATCTCATTGAGCATATGAAAATCTCATACCACTCAGTTCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTATTGGTCCACTGCCAAAAGGAAATTGTTCAAAGGTATTTGCTCAGCATGGTTGTCAACTTTGCTTAAAATTATTTGATAGTCCTAGATCTCTCATCGAGCATAAAGAAACATGCCGTCCGTCTGCACCTACTCCTCTGGGAACAGGGGCATTACCCTATATAAGATCCCAAATTAGTTGTCGAGATTCTCTTGATGAAAACCACGCTGGTAGACACCCTGGAGCAATTGCAATTGATTGTGAAATGGTTGGTGGTGGAAGTGATGGATCACTTGACCTTTGTGCTAGAGTGTGCCTGGTCGATGAAGATGAGAATTTAATTCTCCACACCTTTGTACAGCCTCAAATCCCAGTTACTAACTATAGATATGATATAACTGGGTTGACAGAAGAGCATCTTAGAGATGCCATGCCACTCAAGGAAGTTCAAGAAAAGGTATTGCAAATTCTGTACAATGGAGAGTCCATCGGCAAGGTTAGATTGGATGGTGGAAAGGCCAAGCTTCTTGTGGGGCATGACCTAGAACATGATTTAGATTGCCTGAAATTGAATTATCCTGATCACATGTTGAGGGACACTGCAAAGTATCGTCCACTGATGAAAACAAACTTAGTCAGCCATTCGCTCAAGTACCTTACCCGAACATATTTAGGTTATGACATCCAGTCAGGTACACATGACCCTTATGAAGACTCTGTTTCTGTGATGAGGCTGTACAAGAGAATTCGGGGCCAAAGACATAGGGAAGAAGGCTTTAGCACATTTACTTCAATTAACGACCTTGGCAATTCTGATAATTGGAGGTCCAAGGAGCTTGAGAACTCCACACCAGATGAACTCTTTGCCATGTCAAAGTCAGACTACAGGTGTTGGTGTTTGGATTTGATGTAA 1080 0.4269 MDGEADPPKTPTKRHKCSACYRQYKKKEHLIEHMKISYHSVHQPKCGVCQKHCKSFESLREHLIGPLPKGNCSKVFAQHGCQLCLKLFDSPRSLIEHKETCRPSAPTPLGTGALPYIRSQISCRDSLDENHAGRHPGAIAIDCEMVGGGSDGSLDLCARVCLVDEDENLILHTFVQPQIPVTNYRYDITGLTEEHLRDAMPLKEVQEKVLQILYNGESIGKVRLDGGKAKLLVGHDLEHDLDCLKLNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDPYEDSVSVMRLYKRIRGQRHREEGFSTFTSINDLGNSDNWRSKELENSTPDELFAMSKSDYRCWCLDLM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0434 359 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 311 IPR047021 GO:0004527
Bisa03g0434 359 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Bisa03g0434 359 Gene3D Classic Zinc Finger 3 65 - -
Bisa03g0434 359 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Bisa03g0434 359 Pfam Exonuclease 139 301 IPR013520 -
Bisa03g0434 359 SUPERFAMILY Ribonuclease H-like 139 305 IPR012337 -
Bisa03g0434 359 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Bisa03g0434 359 SMART exoiiiendus 137 311 IPR013520 -
Bisa03g0434 359 Gene3D - 135 320 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0434 Bisa-ChrBisa03 5448127 5451216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0434 1 357 C2H2 Transcription Factor Family AT3G27970 53.352 2.24e-143 408