Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0422 ATGTCCTTCTTCTTCCTCTTCTCCTTTGTTCTCCTCGCTTTCCCCCTTTCTTCCCTCTCCGCAACCGTTCCCTGCCCTCTCAACTTCACCGTCCTCTCCGTCGTCAGCGGCGGCTCCGCCCCCTCCTTCGACCCCTCCACCGTCTGCCAGTACACCCGCATGGCCCTCCGTCTCGTTCAGTCCGACTACCTCCGTCGCACCGGATTCTTCCTCCCTCCTCTCAACTCCTCCCAGACCTGCTGGGACGATTTCCAGTCCTTCATCAATCAATTCAACTCCAACTTCCACGTTCAATCCTCTTGCGGCTTCCAGACCAGCTGGATCTCCGAGGGATGCATGAACATCACCACCAGGCAAGAGTTTGAATCCCGGGTTCCCAAATCTTCTCTTCAGGATGTGCGGAACAATTGCAATCAATCGCTCTACGACAACACCCCCTGCGCCCTCTGTACCACCAGCTTGTCCAGCTTGCAAGCTTCGTACCTCACCGGATTCTCCGTCGGGAACGTCTCCGATTGTACCGCATACCCCTCGATTTACGCCGCCGCCTTTGCCAATCAGGGTGGCCCCACCGACAGAGGCACTGCTAAGTGCTTATTCTCTCTGGATTTCACGTCCTCACCTTCCAGTGGTAAGAAACGAACCATTCTAATTGTGGTTCTTGTGATTTTCTGTGTGTTAGTTTTGTTCCTGGTAATTACGGGATTCTGGGTTCACCGGAGATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGTATAATTAACACTGAGATGGGTGTAGTTTCTGGGTTGGATTCCATGAATGAGAGCACTACTTTGATTAGGTTCACATTCGATGACATTAAGAAAGCAACCAGGAACTTCTCTAGGGACTATATAATAGGAAGAGGAGGGTATGGGAATGTGTATAAAGGGGTGCTTCCAGATGGAACTGAAGTTGCATTGAAAAGGTTTAAGAATTGCTCTGCCGCTGGAGATGCTAGTTTCACTCATGAAGTTGAGGTTATTGCAAGCGTTAGGCATGTAAACCTCGTTGCTCTCAGAGGTTATTGTACTGCCACAACTCCTCTAGAGGGCCACCAGAGGATCATCGTTTGTGATTTGATGAACAATGGGAGTCTTCACGATCACTTATTTTCGTCTACGGGGAAAAAACTCAGTTGGCCAATCCGTCAACAGATTGCACTAGGCACTGCAAGAGGATTGGCTTATCTGCATTATGGGGCTCAACCTTCCATCATCCACAGAGACATCAAAGCCAGTAATATACTTCTGGATGACCAGTTTGAAGCCAAGGTTGCAGACTTTGGACTTGCAAAGTTCAACCCTGAGGGAATGACCCATATGAGCACGAGGGTTGCGGGAACTATGGGGTATGTTGCTCCCGAGTACGCCTTGTACGGACAGTTGACAGAGAGGAGTGATGTCTTCAGTTTTGGTGTGGTGCTTCTTGAGCTTCTAAGTGGGAAGAAGGCTCTTCAAATGAACGAGGATGGCCAACCCAATGCTCTGAATGACTTGGCTTGGTCATTGGTCAGGGCAGGAAGAGCTCTGGATGTTGTTGAAGATGGCATGCCAGAAGCAGGATCTCCAGAGGTTCTTGAGAAGTATGTGTTAATTGCTGTGCTTTGTTCTCACCCACAGTTGTATGCTAGGCCTACAATGGATCAGGTTGTGAAAATGTTCGAGACAGATCAATCAGTACCCTCGATACCAGAAAGGCCGATTCCTCTTGTTGCTGGAAAGGTTGATATCGAGAGATCTGTGGGCAGCTCTGGCTCCGGTCACCTCTCTAGTCCAACAGGTTATCAGACATATGCATTTGAAAGTGATTGCCATTCTTCTAATTCTAAGGAAGAAGAGGGAAGTTCAGGCTCCAGAATACTCAGTACATAG 1899 0.4887 MSFFFLFSFVLLAFPLSSLSATVPCPLNFTVLSVVSGGSAPSFDPSTVCQYTRMALRLVQSDYLRRTGFFLPPLNSSQTCWDDFQSFINQFNSNFHVQSSCGFQTSWISEGCMNITTRQEFESRVPKSSLQDVRNNCNQSLYDNTPCALCTTSLSSLQASYLTGFSVGNVSDCTAYPSIYAAAFANQGGPTDRGTAKCLFSLDFTSSPSSGKKRTILIVVLVIFCVLVLFLVITGFWVHRRLKKKKKKKKKRSIINTEMGVVSGLDSMNESTTLIRFTFDDIKKATRNFSRDYIIGRGGYGNVYKGVLPDGTEVALKRFKNCSAAGDASFTHEVEVIASVRHVNLVALRGYCTATTPLEGHQRIIVCDLMNNGSLHDHLFSSTGKKLSWPIRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDDQFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQMNEDGQPNALNDLAWSLVRAGRALDVVEDGMPEAGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMFETDQSVPSIPERPIPLVAGKVDIERSVGSSGSGHLSSPTGYQTYAFESDCHSSNSKEEEGSSGSRILST 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0422 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Bisa03g0422 632 SUPERFAMILY Protein kinase-like (PK-like) 265 564 IPR011009 -
Bisa03g0422 632 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Bisa03g0422 632 ProSiteProfiles Protein kinase domain profile. 289 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g0422 632 Gene3D Transferase(Phosphotransferase) domain 1 370 571 - -
Bisa03g0422 632 CDD STKc_IRAK 295 564 - -
Bisa03g0422 632 Pfam Protein kinase domain 292 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g0422 632 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 248 368 - -
Bisa03g0422 632 Gene3D Phosphorylase Kinase; domain 1 244 368 - -
Bisa03g0422 632 SMART serkin_6 289 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g0422 632 MobiDBLite consensus disorder prediction 609 632 - -
Bisa03g0422 632 Pfam SPARK 22 169 IPR043891 -
Bisa03g0422 632 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 618 - -
Bisa03g0422 632 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 370 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0422 Bisa-ChrBisa03 5326342 5328240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0422 1 618 Receptor kinase-like Gene Family AT2G48010 64.573 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bisa03g0422 Pkinase 3.4e-42 CL0016