Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0383 ATGTTGAACGGTTTCGGCCTAGGCCACTGTTGCCCTCCATATCTAGATTTAGTGAAGTATCGTTTTCAAAGACAGTTCTTGATCAACAAGAAACGATATCCTCTCTCTCCTTTTTGGGCTTTCGTTCATTTCTTTCTACGCCAAAATTCGCCCTTGCGCTGTTTTAAAGCCATATTTCAGATTTTCCGAGCATCGGAAAATATGAGTGATTTTCCGAAGCACTCAAATCTTCCGGATAAAGATCATGCACCGCAAGTTCAGAGACCATGTGACTACTGCGGCGACTCCACAGCTCTCCTTTACTGCCGAGCTGATTCCGCCAAGCTTTGCTTCTCTTGCGATCGTGAAGTTCACTCTACCAACCAGCTTTTCTCGAAGCACACTCGCACTCAGCTCTGTGACGCCTGTGATGATTCCCCAGCCACAATACTCTGTTCGACCGAATGCTCCGTTCTCTGCCAGAATTGTGACTGGGAACGGCACAACCTGTCACTATCTTCGGTACATGACCGGAGGCCACTCGAGGGCTTTACTGGCTGCCCTTCTGTCACTGAGTTGTTGACGATTCTAGGTTTTGAAGATTTGGGCAAAAAGGACCTGTTTTCAACCCAGGATTGTGGGGGATGTGGCGGCGGCGGCGGCGGCGGCGGGCTTTTGGGATCTGAGCTTGAGGAGGGCCTTTCGGATTTGTTGGTATGGGATGCTCCTGCTGTTGTAAGCCTTGACGATTTGATAACTTCCACAAGTTCGTCTCATAATTATCAGGCCATGGAGGTTCCTCCTCTACCTAAGAATCGTAAGACTGCTTGTGGGCAACACAAAGAAGAAACCATTACTCAACTTCGTAACCTTGCAAAGTCGGAACCCAGCTTGAGTTTTGGTGATGTAGATACTGAAGGGGTGAGCACTATGCACCCGTTAGGCCATGAACAATATGTGCAGTCAGGAAGTTTGTCCATTGGTTTTGAACATGATTTTGAGGCTGATATGTTTTCTTGTGAGGCAGGTCATTTTGAGTGGCCTAGAAATAGGAGCGAGACTGCAAATCAAGTTGTTCCTCCTAATACATCGCTGAGAACTTATAATGAGGAAGTTAATGATACACATTCAATTTCTCTTGTTCCTCCTAATACCTATTGTAATAATGGTCGACAACCGCCAAATTCTCTGAACTCTGAAATCTTATCGCCCACTCCAAAAGTTGCTCCATATGAGCTAACAAGTCAAGAAAGGGACTCTGCATTATTACGTTACAAGGAGAAGAAGAAAACAAGAAGATTTGACAAGCACATAAGGTATGAATCGCGAAAAGCTCGGGCAGAAAGCAGGACAAGAATCAAGGGTCGATTTGCTAAGATGGAACACTGA 1368 0.4583 MLNGFGLGHCCPPYLDLVKYRFQRQFLINKKRYPLSPFWAFVHFFLRQNSPLRCFKAIFQIFRASENMSDFPKHSNLPDKDHAPQVQRPCDYCGDSTALLYCRADSAKLCFSCDREVHSTNQLFSKHTRTQLCDACDDSPATILCSTECSVLCQNCDWERHNLSLSSVHDRRPLEGFTGCPSVTELLTILGFEDLGKKDLFSTQDCGGCGGGGGGGGLLGSELEEGLSDLLVWDAPAVVSLDDLITSTSSSHNYQAMEVPPLPKNRKTACGQHKEETITQLRNLAKSEPSLSFGDVDTEGVSTMHPLGHEQYVQSGSLSIGFEHDFEADMFSCEAGHFEWPRNRSETANQVVPPNTSLRTYNEEVNDTHSISLVPPNTYCNNGRQPPNSLNSEILSPTPKVAPYELTSQERDSALLRYKEKKKTRRFDKHIRYESRKARAESRTRIKGRFAKMEH 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0383 455 Pfam CCT motif 411 453 IPR010402 GO:0005515
Bisa03g0383 455 CDD Bbox1_BBX-like 89 132 - -
Bisa03g0383 455 ProSiteProfiles Zinc finger B-box type profile. 85 132 IPR000315 GO:0008270
Bisa03g0383 455 SMART bboxneu5 85 132 IPR000315 GO:0008270
Bisa03g0383 455 SMART bboxneu5 133 174 IPR000315 GO:0008270
Bisa03g0383 455 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 89 453 - -
Bisa03g0383 455 ProSiteProfiles CCT domain profile. 411 453 IPR010402 GO:0005515
Bisa03g0383 455 ProSiteProfiles Zinc finger B-box type profile. 128 174 IPR000315 GO:0008270
Bisa03g0383 455 Pfam B-box zinc finger 131 173 IPR000315 GO:0008270
Bisa03g0383 455 Pfam B-box zinc finger 87 130 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0383 Bisa-ChrBisa03 4891371 4898126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0383 85 426 C2C2-CO-like Transcription Factor Family AT2G47890 41.429 2.07e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa03g0383 CCT 1.8e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0383 03 4891371 4898126 Bisa03g0383 03 4891371 4898126 ECH