Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0374 ATGGAGTTGTACGGTCGGAACCCGGCGAGGAATGGGCAGCAATCGGGTAATCAATCCGAATGGCGCCCGTCAGGAGGCGAAACTGGGCTTGAAGAATCGATGTGGCATTTAACACTCGGTAGTAGTGAATCTTACCCGGAGCGACCCGGCGTACCCAATTGTGTGTATTACATGCGAACCGGGTTCTGTGGATATGGTAGCAGGTGCCGTTACAATCATCCTCGTGATCGTGCCGCGGTTGCAGCAGCTGTAAGAGCTACGGGGGAGTACCCAGAACGAGTGGGGGAACCTCCGTGTCAGTATTATTTAAAAACTGGAACCTGCAAATTTGGTGCATCCTGTAAATTCCACCATCCAAAACATGCAGGTGGATCCTTAAGTCAAGCTCCGCTAAATATTTATGGATACCCATTACGGCTGGGTGAGAAAGAATGCTCCTATTATTTGAAAACGGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCATCCTCAACCAGCTGGCACATCAATTCCAGCATCTGCACCTCAATTTTATCAACAGGTGCAGTCTCCCTCGGTTCCTCTCGCTGAACAGTATGGGAGTGCATCCTCCAGCTTGAGAGTGGCTAGGCCTTCAATATTGCCTGGTTCATATGTGCAAGGGGCTTATGGTCCTGTCCTTCTTTCCCCAGGGGTTGTTCCCTTTCCTGGATGGAGTCCTTATACGGCACCTGTAAGTCCCGTGTTATCTCCTGGTGCTCAATCTGCTGTTGGGGCTACTTCTCTGTATGGAGTGACCCAGTTGTCTTCATCAACTTCAGCCTTTGCTAGACCATACACTCCTCTGCCCTCTACTACTGGCCTCTCTGGCAGTAGCCAGAAGGAGCAAATATTTCCTGAAAGACCTGGTGAACCTGAATGCCAATACTATATGAGAACAGGGGACTGTAAATATGGATTAGCTTGTCGATATCATCATCCTAGGGACCGGACTGTGACACGGCCACTTCTCAGCCCCATTGGTCTTCCATTACGTCCGGGGGTACAACCTTGTGCTTTTTACTTGCAAAACGGGCATTGCAAGTTTGGCTCCACGTGCAAATTTGACCACCCGATGGGGTCTATGAGATATAGCCCATCAGCATCTTCTCTCATTGATATGCCAGTTACTCCATACCCTGTTGGATCTTTGCTGTCTACCCTGGCTCCTTCAACAACGTCATCAGAGCTTCGGCCTGAACTGATGCCGGGCTCCAAAAAGGAATCTTTTTCCTCCAGGATGCCTTCCTCTGGAAACAGCTCTGGCAGTTCTGTCAGTTTAATTTTCTCACAAGGTGGATCTGTCTCTCTTTCTGATGTGCAACTCTCAAGTCAGAATTCTACCCCTTTAAGCAGTAGCAGAAATACTAGACAAAGTGGTGACATACGTTGA 1416 0.4866 MELYGRNPARNGQQSGNQSEWRPSGGETGLEESMWHLTLGSSESYPERPGVPNCVYYMRTGFCGYGSRCRYNHPRDRAAVAAAVRATGEYPERVGEPPCQYYLKTGTCKFGASCKFHHPKHAGGSLSQAPLNIYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPAGTSIPASAPQFYQQVQSPSVPLAEQYGSASSSLRVARPSILPGSYVQGAYGPVLLSPGVVPFPGWSPYTAPVSPVLSPGAQSAVGATSLYGVTQLSSSTSAFARPYTPLPSTTGLSGSSQKEQIFPERPGEPECQYYMRTGDCKYGLACRYHHPRDRTVTRPLLSPIGLPLRPGVQPCAFYLQNGHCKFGSTCKFDHPMGSMRYSPSASSLIDMPVTPYPVGSLLSTLAPSTTSSELRPELMPGSKKESFSSRMPSSGNSSGSSVSLIFSQGGSVSLSDVQLSSQNSTPLSSSRNTRQSGDIR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0374 471 ProSiteProfiles Zinc finger C3H1-type profile. 93 121 IPR000571 GO:0046872
Bisa03g0374 471 Gene3D - 47 126 - -
Bisa03g0374 471 Gene3D - 295 377 - -
Bisa03g0374 471 ProSiteProfiles Zinc finger C3H1-type profile. 340 368 IPR000571 GO:0046872
Bisa03g0374 471 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
Bisa03g0374 471 SUPERFAMILY CCCH zinc finger 300 325 IPR036855 GO:0046872
Bisa03g0374 471 Gene3D - 127 173 - -
Bisa03g0374 471 MobiDBLite consensus disorder prediction 1 27 - -
Bisa03g0374 471 SUPERFAMILY CCCH zinc finger 96 121 IPR036855 GO:0046872
Bisa03g0374 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 342 367 IPR000571 GO:0046872
Bisa03g0374 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 50 75 IPR000571 GO:0046872
Bisa03g0374 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 298 323 IPR000571 GO:0046872
Bisa03g0374 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 142 166 IPR000571 GO:0046872
Bisa03g0374 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 96 120 IPR000571 GO:0046872
Bisa03g0374 471 SMART c3hfinal6 296 323 IPR000571 GO:0046872
Bisa03g0374 471 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Bisa03g0374 471 SMART c3hfinal6 93 120 IPR000571 GO:0046872
Bisa03g0374 471 SMART c3hfinal6 340 367 IPR000571 GO:0046872
Bisa03g0374 471 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Bisa03g0374 471 MobiDBLite consensus disorder prediction 446 471 - -
Bisa03g0374 471 MobiDBLite consensus disorder prediction 398 433 - -
Bisa03g0374 471 SUPERFAMILY CCCH zinc finger 52 77 IPR036855 GO:0046872
Bisa03g0374 471 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Bisa03g0374 471 PANTHER PROTEIN PHOSPHATASE RELATED 19 398 - -
Bisa03g0374 471 MobiDBLite consensus disorder prediction 417 433 - -
Bisa03g0374 471 SUPERFAMILY CCCH zinc finger 140 167 IPR036855 GO:0046872
Bisa03g0374 471 FunFam Zinc finger nuclease 2 47 124 - -
Bisa03g0374 471 MobiDBLite consensus disorder prediction 8 24 - -
Bisa03g0374 471 SUPERFAMILY CCCH zinc finger 342 371 IPR036855 GO:0046872
Bisa03g0374 471 ProSiteProfiles Zinc finger C3H1-type profile. 296 324 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0374 Bisa-ChrBisa03 4770858 4779305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0374 1 420 C2H2 Transcription Factor Family AT5G18550 51.591 2.85e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa03g0374 zf-CCCH 1e-08 CL0537