Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0347 ATGGTAGAAACTAGGCGCAGCTCCTCATCTTCCAAGCGCTCTATCTCTTCCCCCCCTCCTTCCAGCGCCAAACGATCCAAGGTGTCCGCGGATGCGTCATCAACCAGTCTCCCATCAGCGGAGATTCTTGGTCAGGTCAACGAATCTGGGAATGAATCTCGAGAACCGGAGCTGCGCCAATCTGATCTGCCAGATACCGATTCGTTGAAGGCTGTGGACGTGGGTGATGCGATGTTACCTGAGAAATCTCCTGTCGAGCCTGTCGAGGGCGAGGCTCTGGTATCGCCGCGGTCTTCAGGTCCGAAAGTGGCATTCTTTGTGTGCGAAACTGCTGTAGAAGCGGAGAGATCAAAGGCTGGCGCGGCGTCGCTTGGGCGGTCAAAGAAACGCCCTACGAAATCCACAAAATCGGGTCCCAAGGCTGCATGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCTCACCTGTCCATGTGTGGGCTCTTCACTGTTGGTCAAGGACGTCAATGTGATTTATGCCTTAAAGATCCAGCTGTTAGTAATATTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTTCATCGGTTGCGTTACTGGAAATCATAGGAGGTAAAGGTACTGTCCAAGTCAATGGCAGGAATTACCAAAAAAATTGCCGTGTGATCTTAAGTGGAGGTGATGAGGTGGTTTTCAGCTCTTCCGGCAAGCATGCTTATATCTTTCAGCAGCTCACCAATAGTAATATAACCACAACGGGGGTGCCTTCTTCTGTTAGTATATTAGAAGCCCAAAGTGCTCCAATCAGTGGAATGCATATTGAAGCTAGATCTGGGGACTCTTCAGCTGTTGCTGGAGCATCGATATTGGCGTCTTTATCTAACCTTCATAAAGATTTATCTCTCCTTCCCCCTCCTGCTAAAACTGGTGAGAATGTCCAACAAAATACTGAGATGTCGTTGCTACCTTCTGGCCATGAGGATGACACTCCGGACAATGAAATGAAGGATGCCGCCAATAATGATGATCCAGCTGGAGTTGTTTCAGCTGAGAAAGCTGTCCTTGCATCCTCCGCTACTGCCAATGAAAATCCAAGCATTGACAGCATGGAAATAGATGCTGGTGTGGATGCAGATATTGGGAAGGTAACTGGGGCTACCTATGAATTAAGGCCATTGTTGCGTATGCTTGCTGGTTCTAGTACTGAATTTGATTTAAGTGGTAGCATTTCCAAAATATTGGAAGAGCGAAGAGATTTAAGAGAACTTCTTAAGGATGTTGATCCCCCAACAATATTGGCATCAACCAGGCGGCAAGCATTTAAGGAGAGTTTACAACAAGGAATTCTAAATCCTGATGATATTGATGTCCAATTTGAAAGTTTCCCATATTTTCTAAGTGATACTACAAAGAACGTTTTGATTGCTTCGACATACATTCATTTGAAGAGCAATAGTTTTGCAAAATATGCTTCGGACCTCCCTTCAGTGTGCCCACGAATATTGTTATCTGGTCCTGCAGGTTCAGAGATATATCAGGAAACTCTATCCAAGGCGCTTTCCAAGCATTTTGGTGCCAGGCTGCTGATTGTGGATTCTCTTTCAATGCCTGGTGGAACACCATCAAAGGACTCTGATTCTGCCAAAGAAGGTTCGAGGTCTGAAAGAACATCTGTGTTTACAAAGCGAAGCGCCCAGGCTACCACATTACAGCATAAGAAACCAACTTCTAGTGTTGATGCTGATATTATAGGTGGATCCACCTTAAGTTCTCAGGCTATGCTTAAACAAGAGGTATCTACTGCATCATCAAAGGGCTCTACTATAAAAACAGGTGACCGAGTAAAATTTGTTGGAAATGTTCCTTCAACTAGTATATCGCTGACAAATTATCCTCCTAGGGGACCAAGCTATGGCTCCAGGGGAAAAGTTCTTCTTGCTTTTGAAGATAATGGGTCTTCAAAAATTGGGGTTCGGTTTGATAAATCAATTCTTGATGGCAATGATCTTGGAGGCCTTTGTGAAGACGATCGTGGATTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGCTCTGGAGGGGATGACACTGACAAGCTTGCTATAAATGAAATTTTTGAGGTTGTTTCCAATCAGAGTAAAAGTGGTGCACTAGTGTTGTTCTTGAAAGACATAGAGAAGGCAATGGTTGGAAACACTGAAGTATTGAAGAGTAAACTTGAAGGTTTGCCACAGAATGTTGTTGTAATTGGCTCTCATACCCAGCCAGACAATCGCAAAGAGAAGACCCATCCTGGTGGCCTTCTGTTTACAAAGTTCGGGAGCAATCAGACTGCACTTCTTGATCTTGCATTTCCGGATAACTTTAGCCGACTTCATGATAGAAGCAAAGAAACCCCCAAAACAATGAAGCAACTAAGTCGTCTTTTCCCCAACAAAGTGACAATACAGCTGCCTCAGGATGAGGTTTTGCTTTCTGATTGGAAACTGCAATTAGAACGTGACATTGAAACTATGAAAGCTCAGTCAAATGTTGTCAGCATACGCTCAGTTCTCAACAGGATTGGATTGGATTGCCCTGACCTTGAGGCTCTTTGCATTAAAGATCAAGCCCTAACGACTGAAAGTGTGGAAAAAATCATTGGCTGGGCTATAAGTAATCATTTTATGCATTCATCTGAAGATTCAATAAAAGACTCTAAACTCATGATATCTACTGACAGCATTAAGTATGGGCTGAACATCCTACAGGGCATTCTAAGTGAAACCAAGAGCTTAAAGAAATCGCTTAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTACTTGCTGATGTTATTCCACCCAGCGATATTGGGGTCACATTTGATGATATTGGAGCCTTGGAAAATGTGAAGGACACCTTGAAGGAATTGGTCATGCTTCCTTTGCAGAGGCCTGAATTGTTTTGTAAAGGGCAGTTGACTAAGCCTTGCAAGGGGATATTGCTCTTTGGGCCACCTGGTACTGGAAAAACAATGCTTGCAAAGGCTGTAGCGACTGAGGCTGGAGCAAATTTCATCAATATTTCGATGTCAAGCATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTACGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATAGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAGAATCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTCATGGTGAATTGGGATGGTCTGCGTACAAAAGATAAAGAGCGTATACTTGTTCTTGCTGCTACAAATAGGCCGTTTGACCTTGATGAAGCTGTTATTAGGAGGCTTCCCCGAAGATTGATGGTAAATTTGCCAGATGCTCCAAACAGAGAAAAGATTCTCAGAGTCATCTTAGCAAAAGAAGATTTGGCACCTGACGTTGATTTGGAAGCAGTAGCAAATATGACTGATGGATATTCAGGAAGCGACTTAAAGAATCTATGTGTCACAGCAGCTCACTGTCCAATACGGGAAATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCATTGTCTGAGGAGAGACCTTTACCTGCATTATGTAGCAGTGCTGACATTCGACCCTTAAAGATGGAAGATTTTAAATATGCACATGAGCAGGTGTGTGCAAGTGTGTCATCGGAGTCGACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGTGGATCCAGAAAAATGAGATCTCTGAGCTATTTCATGTAA 3783 0.4351 MVETRRSSSSSKRSISSPPPSSAKRSKVSADASSTSLPSAEILGQVNESGNESREPELRQSDLPDTDSLKAVDVGDAMLPEKSPVEPVEGEALVSPRSSGPKVAFFVCETAVEAERSKAGAASLGRSKKRPTKSTKSGPKAAWGKLLSQCSQNPHLSMCGLFTVGQGRQCDLCLKDPAVSNILCKLRHIERGGSSVALLEIIGGKGTVQVNGRNYQKNCRVILSGGDEVVFSSSGKHAYIFQQLTNSNITTTGVPSSVSILEAQSAPISGMHIEARSGDSSAVAGASILASLSNLHKDLSLLPPPAKTGENVQQNTEMSLLPSGHEDDTPDNEMKDAANNDDPAGVVSAEKAVLASSATANENPSIDSMEIDAGVDADIGKVTGATYELRPLLRMLAGSSTEFDLSGSISKILEERRDLRELLKDVDPPTILASTRRQAFKESLQQGILNPDDIDVQFESFPYFLSDTTKNVLIASTYIHLKSNSFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALSKHFGARLLIVDSLSMPGGTPSKDSDSAKEGSRSERTSVFTKRSAQATTLQHKKPTSSVDADIIGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSTSISLTNYPPRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSILDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDTDKLAINEIFEVVSNQSKSGALVLFLKDIEKAMVGNTEVLKSKLEGLPQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEVLLSDWKLQLERDIETMKAQSNVVSIRSVLNRIGLDCPDLEALCIKDQALTTESVEKIIGWAISNHFMHSSEDSIKDSKLMISTDSIKYGLNILQGILSETKSLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVDLEAVANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALSEERPLPALCSSADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0347 1260 ProSitePatterns AAA-protein family signature. 1099 1118 IPR003960 GO:0005524|GO:0016887
Bisa03g0347 1260 Pfam AAA+ lid domain 1149 1185 IPR041569 -
Bisa03g0347 1260 SUPERFAMILY SMAD/FHA domain 160 234 IPR008984 GO:0005515
Bisa03g0347 1260 Gene3D - 954 1234 IPR027417 -
Bisa03g0347 1260 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 438 1259 - -
Bisa03g0347 1260 Pfam ATPase family associated with various cellular activities (AAA) 996 1125 IPR003959 GO:0005524|GO:0016887
Bisa03g0347 1260 Gene3D - 1128 1222 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 324 338 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 118 140 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 557 582 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 1 51 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 534 582 - -
Bisa03g0347 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 955 1234 IPR027417 -
Bisa03g0347 1260 SMART AAA_5 992 1129 IPR003593 GO:0016887
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 320 340 - -
Bisa03g0347 1260 Gene3D - 127 250 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 52 66 - -
Bisa03g0347 1260 MobiDBLite consensus disorder prediction 1 94 - -
Bisa03g0347 1260 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 954 1130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0347 Bisa-ChrBisa03 4497338 4508009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0347 991 1200 Calmodulin-binding Proteins AT3G56690 36.449 1.15e-31 132