Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0342 ATGAAGTTCTGCAAGACGTATCAGGAGTACATGCAAGGGCAAGAGAAGCAACTACCGGGGGTTGGCTTCAAGAAGCTCAAGAAGATCTTGAAGAAGTGTAGAAAAGACTATCAAACCCAGAATCAAAATGGCCTCATTAATCAAGCCCTAGGCATCCAGACCTGTCCTGATCATTGCCCAGTGTGCGATGGGACATTCTTCCCTTCCCTTCTCAATGAAATGTCAGAAATAGTAGGCTGCTTTAATGAGCGAGCACAAAGATTGCTGGACCTACACCTTGCTTCTGGCATCAGAAAGTACTTCTTTTGGATCAAAGGAATGTTACAAGGAAACCATGCTGCTTTAATTCAAGAAGGCAAAGATTTGACTACCTATGCACTGATAAATGCCACTGCTATTCGAAAAATACTGAAGAAATATGATAAGGTTCATTATTCCAAGCAAGGGCAATTATTCAAGTCACAAGTTCAGCGTATGCACATGGAAATTCTACAAAGTCCCTGGTTTTGTGAGCTGATGGCTTTCCACATCAATTTAAGGGAAACCAACCCCCAGTCAGAGCAAACAACTATATGGTTTGATGGATGTTATCTCACATTTAGAGATGGCAAACCATCAATTACTTGCGAGCTCTTCGAATCCGTCAACCTTGATATTGACTTGACTTGTTCTATATGCTTGGACACAGTATTTGATCCAGTTGCTCTTACTTGTGGCCATATATTCTGCTACATGTGTGCTTGCTCAGCTGCATCAGTAACTATAGTTGATGGACTCAATGAAGCAAATCCTAAAGAAAAATGTCCTCTCTGCCGAGAGAGTGGAGTTTATGAAGGTGCTATGCACTTGGAAGAATTAAATATTCTGTTAGGCAGGAGGTGCCCAGAATACTGGGAACAAAGACTTCAGACAGAGAGGGCAGAGAGGATAAAGCAGATAAAGGAGCATTGGGAATCAGCGTGTAGGGCTGTATTGGGCGTCTAG 984 0.4238 MKFCKTYQEYMQGQEKQLPGVGFKKLKKILKKCRKDYQTQNQNGLINQALGIQTCPDHCPVCDGTFFPSLLNEMSEIVGCFNERAQRLLDLHLASGIRKYFFWIKGMLQGNHAALIQEGKDLTTYALINATAIRKILKKYDKVHYSKQGQLFKSQVQRMHMEILQSPWFCELMAFHINLRETNPQSEQTTIWFDGCYLTFRDGKPSITCELFESVNLDIDLTCSICLDTVFDPVALTCGHIFCYMCACSAASVTIVDGLNEANPKEKCPLCRESGVYEGAMHLEELNILLGRRCPEYWEQRLQTERAERIKQIKEHWESACRAVLGV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0342 327 ProSiteProfiles SPX domain profile. 1 154 IPR004331 -
Bisa03g0342 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 201 325 IPR013083 -
Bisa03g0342 327 CDD RING-HC_BAH1-like 213 286 - -
Bisa03g0342 327 ProSiteProfiles Zinc finger RING-type profile. 223 272 IPR001841 -
Bisa03g0342 327 ProSitePatterns Zinc finger RING-type signature. 238 247 IPR017907 -
Bisa03g0342 327 Pfam Zinc finger, C3HC4 type (RING finger) 220 273 - -
Bisa03g0342 327 CDD SPX_BAH1-like 2 150 - -
Bisa03g0342 327 SMART ring_2 223 271 IPR001841 -
Bisa03g0342 327 SUPERFAMILY RING/U-box 216 275 - -
Bisa03g0342 327 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 326 IPR033326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0342 Bisa-ChrBisa03 4478805 4481921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0342 220 281 C3H Transcription Factor Family AT4G28270 40.299 1.50e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0342 03 4478805 4481921 Bisa03g0342 03 4478805 4481921 ECH