Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0319 ATGGATATGAACAACCACACTCATGAGTATGCCCATAGCGGCGAGGTCATGCTCGCTTCCGCCATTTTACTCTTCCTATTTTTTCTCATTGTTGTTTTGCTTCAAACCTTCGCTAACATCTGCTTCCGCCGCCGATACTCTAATCGTCGTCACCGCCAAATTCAACGCCTCTTTCCCAATCTCCCCGCCGCCGCCGCCTCCTCCGCTACCACTAGCAAGGGCCTTGATCCTTTCCTCTTCAAATTCCTCCCCACCTTCACCTACTCTTCGGCCACCCACCGCTCACTGCCGGAGTGTGCGGTCTGCTTGTCGGAGTTCGAAGACAACGACGAAGGTCGTGTCCTTCCCAACTGCAATCATGGTTTCCACACTCATTGCATCGATACGTGGTTCCGATCTCACTCGAGCTGCCCGATATGTCGAGCTCTGGTGGAACCAAAGAAAATCTGGTCGCAGAGAACAGAGGTGTGCGTTTCAGAGGGGGAATTAGGGGGTTGCTCGAATCTTCCACCGCCGATCGGGTGCCCCAGAAAGGGATTTGATTTAGAAGTTGTAAGCGTAATAATGGAGGGGAGCGAGCTGAGGAGTTCGGGGTCGGGTCGACCCGAAGAGAGCAGAATGAAAATTTTCCGATGA 636 0.5283 MDMNNHTHEYAHSGEVMLASAILLFLFFLIVVLLQTFANICFRRRYSNRRHRQIQRLFPNLPAAAASSATTSKGLDPFLFKFLPTFTYSSATHRSLPECAVCLSEFEDNDEGRVLPNCNHGFHTHCIDTWFRSHSSCPICRALVEPKKIWSQRTEVCVSEGELGGCSNLPPPIGCPRKGFDLEVVSVIMEGSELRSSGSGRPEESRMKIFR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0319 211 CDD RING-H2_EL5-like 98 141 - -
Bisa03g0319 211 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Bisa03g0319 211 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 144 IPR044675 -
Bisa03g0319 211 Pfam Ring finger domain 98 141 IPR001841 -
Bisa03g0319 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 146 IPR013083 -
Bisa03g0319 211 SMART ring_2 99 140 IPR001841 -
Bisa03g0319 211 FunFam E3 ubiquitin-protein ligase ATL6 63 147 - -
Bisa03g0319 211 SUPERFAMILY RING/U-box 82 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0319 Bisa-ChrBisa03 4256591 4257226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0319 10 145 Rapid Response to Elicitors AT3G16720 47.183 5.12e-39 134