Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0317 ATGGCATTTCTTCACTCTCTTCTTCTTCTCCTTCCCTTGTTTACCTCTTTAGCTTTTGCAGACAATCTTCCCTCCACTAATGTGTCCCGTGGAACACTCTGCAATTCAACCCCTGACCCAAATTTTTGCAAGACTGTTCTCCCTCCCCAAAACAGCAATGTCTACGACTACGGCAGATTCTCCGTCCGAAAATCCTTATCACAGGCTCGTAAATTCATGTACCTCGTCGACAGGTACCTCCAACGAGGACAGTCGTCCTTGTCGCCGGCCGCCATGCGTGCACTCGAAGATTGCCGGACTCTGGCGGAGCTCAACTATGACTTCCTTTCCAATTCCTCTCAAACTGTGGATAAAACATCCAAGTTTCTCCCAACTTCGCAAGCTGACAACGTTCAAACATTACTCAGTGCCATTCTAACCAACCAGCAAACCTGCTTGGATGGCATTCAAGAAACGGCGTCGGCTTGGAGCATTCGAAACGGCCTCACTCTTCCACTCTCCAGCGACACCAAGTTATACAGTGTGTCTCTCTCTCTCTTCACAAAGGCCTGGGTTCCCAATAACAAAAACAAAACTGTGCTGTTTCGCCCTACCAAGACACAACTTAGATTCAGAAATGGCCGTCTCCCACTTAAGATGTCGAGCAGAACACGTGCCATCTACGAGGCAGTCAGTCGTAGAAATCTGCTCCAGGCACCCGTTAACACGGTTTCCGTCAGCGACATCGTCATAGTTAGCCAAGACGGAACCGGAAACTTCACCACCATCAACGACGCCGTTTCTGCCGCCCCGAACAAGTCTGAATCCACCGATGGTTACTTCCTCATCTACGTCACCGCTGGCGTTTACGAAGAATACGTCTCCATCGATAAGAAGAAAACGTACTTGATGTTGGTCGGAGACGGTATCAACAAGACCATCATTACAGGCAATCGCAGCGTGGCTGATAATTTTACAACCTTCAACTCCGCAACTTTCATGGTAACAGGGGAAGGATTCGTGGGGGTGAACATAACGTTTCGTAACACGGCAGGGGCAATAAAGCACCAAGCGGTTGCGGTTCGAAACGGAGCGGATTTGTCCACGTTTTACAGTTGCAGCTTCGAGGGGTATCAAGACACGTTATACGTGCACTCTATGAGGCAGTTTTACAGGGAATGCGATGTCTACGGCACGGTGGATTTCATTTTCGGAAACGCTGCCGTTGTGTTCCAAAACTGCAATTTGTATCCCCGTTTACCTCTGCAAGGCCAGTTCAACGCCATCACGGCTCAGGGTCGGGCCTACCCGGATCAGAACTCGGGCATCTCCATCCACAACTGCACTATTAGAGCGTCTGATGAGTTGGCAGCTGGCAATTGGTCGGTGGAGACGTATCTTGGAAGGCCCTGGAAGAACTATTCCAGGACGATTTATATGCAGAGCTTCATGGACAGTGTGATCAATAAGGCTGGTTGGAAGGAATGGGATGGAAGTTTTGCACTGGACACGTTGTACTATGCGGAGTTTAATAACAGTGGGCCAGGGTCCAGCCTGGACAAACGAGTGACCTGGCCGGGTTTCCACGTCATCAACGCTACGGATGCGGCTAATTTTACAGTCTCCAACTTCTTGCTGGGGGATGTCTGGTTGCCTCTCACTGGAGTCACTTACACTAGCGCCTTGATTTAG 1671 0.4979 MAFLHSLLLLLPLFTSLAFADNLPSTNVSRGTLCNSTPDPNFCKTVLPPQNSNVYDYGRFSVRKSLSQARKFMYLVDRYLQRGQSSLSPAAMRALEDCRTLAELNYDFLSNSSQTVDKTSKFLPTSQADNVQTLLSAILTNQQTCLDGIQETASAWSIRNGLTLPLSSDTKLYSVSLSLFTKAWVPNNKNKTVLFRPTKTQLRFRNGRLPLKMSSRTRAIYEAVSRRNLLQAPVNTVSVSDIVIVSQDGTGNFTTINDAVSAAPNKSESTDGYFLIYVTAGVYEEYVSIDKKKTYLMLVGDGINKTIITGNRSVADNFTTFNSATFMVTGEGFVGVNITFRNTAGAIKHQAVAVRNGADLSTFYSCSFEGYQDTLYVHSMRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRLPLQGQFNAITAQGRAYPDQNSGISIHNCTIRASDELAAGNWSVETYLGRPWKNYSRTIYMQSFMDSVINKAGWKEWDGSFALDTLYYAEFNNSGPGSSLDKRVTWPGFHVINATDAANFTVSNFLLGDVWLPLTGVTYTSALI 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0317 556 FunFam Pectinesterase 236 555 - -
Bisa03g0317 556 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Bisa03g0317 556 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Bisa03g0317 556 Pfam Plant invertase/pectin methylesterase inhibitor 32 179 IPR006501 GO:0004857
Bisa03g0317 556 Gene3D - 236 555 IPR012334 -
Bisa03g0317 556 NCBIfam pectinesterase inhibitor domain 3 154 IPR006501 GO:0004857
Bisa03g0317 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 182 IPR035513 -
Bisa03g0317 556 Pfam Pectinesterase 243 541 IPR000070 GO:0030599|GO:0042545
Bisa03g0317 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 183 IPR035513 -
Bisa03g0317 556 SMART PMEI_2 24 179 IPR006501 GO:0004857
Bisa03g0317 556 PANTHER PECTINESTERASE 29 545 - -
Bisa03g0317 556 CDD PMEI-like_3 32 184 - -
Bisa03g0317 556 FunFam Pectinesterase 31 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0317 Bisa-ChrBisa03 4238685 4240897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0317 8 556 Carbohydrate Esterase AT4G02330 62.214 0.0 713