Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0316 ATGGCTTTCAAGCATTTCCCTCTTCTTGCACTCTCGTTTTCCCTGTTTCTGTCGTTGTCTATGGCGGCATCACATAGTCATCATAAAAACTATAAATCTTCTCCAGAAGCCATTTGCGACTCCAGTACTATCAACCCATCTTATTGCAAGCGTGTTCTCGCTAATGAAACCGGTAACGACATCTATGACTATTGTCGCATCTCTTTTCGAAAATCCTTATCCCAGTCCCGTAAGTTTGTCAACTTAGTGGACTTCTATCTTCAATCTTCCTCCTCTTTGTCTCAACCCACTGTTCGAGCCCTCCAAGATTGCCACTTCCTCTCTCAACTCAACTTGGAATACTTGTTAAACACCTATCCCGCTGTAAATCAATCCATTGGTTCTCTTCCCCTTTCTGAAGCCGAAGATGCTCAAACCCTCCTCAGTGCCGTTCTCACAAACCAACAGACTTGCTTGGAAGGCCTTCAGACCACAGCTTCGGATTCAAGAGTGGAGAACGAGCTTTCTACCCCACTCTCTAACGACACTGACCTTCACACTGTCACTCTGGATCTCTTCGTCAAGGCTTGGATTCCTGACGACACAACCAAATCATCGTCATCCTCGCCCAAAGATCATGGAAAACATAAAGGTTTCTCGAATGGTCGTTTACCAATGAAGATGTCAAAAGGAGCACGTGACGTATACGAGTCCGCTAAGGGACGCAGCAGAAAGTTACTTCAAACTGTCAATGACGACGACAGTGTAGTTATAGGGGACATAGTGGTCGTGAGTAAGGATGGAAGCGGGAACTTCACCGCCATCAACGACGCCATAGCTGCAGCACCAAATAACACGGCTAACAGTGATGGCTACTTCTTGGTATATATCACAGAGGGTGTGTATCAGGAATACGTCACCATCCCCAAAAACAAGAAGAACTTGATGCTATTGGGTGATGGAATCAACCGCACCGTCATCACCGGGAGTCGCAGCGTTGTGGATGGCTGGACAACATTCAATTCAGCCACATTTGTCCCGTGTCTGGGTCTGGCTATCTACTGTGTTGTTACGATTTTTCGATCATCTCTATGCTCTGGCCTTTGGTGCTCCATCGATCTAGCAATCCCGCTTTTGCTTTCGGTTTCCCGATCCCACATCTCTAAACTAGTGAACCCCCAAGCCCCAAATCGCGTTTGTCTCGTATCTGAACCACCAATGAATCCCTAG 1209 0.4673 MAFKHFPLLALSFSLFLSLSMAASHSHHKNYKSSPEAICDSSTINPSYCKRVLANETGNDIYDYCRISFRKSLSQSRKFVNLVDFYLQSSSSLSQPTVRALQDCHFLSQLNLEYLLNTYPAVNQSIGSLPLSEAEDAQTLLSAVLTNQQTCLEGLQTTASDSRVENELSTPLSNDTDLHTVTLDLFVKAWIPDDTTKSSSSSPKDHGKHKGFSNGRLPMKMSKGARDVYESAKGRSRKLLQTVNDDDSVVIGDIVVVSKDGSGNFTAINDAIAAAPNNTANSDGYFLVYITEGVYQEYVTIPKNKKNLMLLGDGINRTVITGSRSVVDGWTTFNSATFVPCLGLAIYCVVTIFRSSLCSGLWCSIDLAIPLLLSVSRSHISKLVNPQAPNRVCLVSEPPMNP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0316 402 Pfam Plant invertase/pectin methylesterase inhibitor 36 173 IPR006501 GO:0004857
Bisa03g0316 402 Pfam Pectinesterase 255 339 IPR000070 GO:0030599|GO:0042545
Bisa03g0316 402 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 188 IPR035513 -
Bisa03g0316 402 MobiDBLite consensus disorder prediction 195 219 - -
Bisa03g0316 402 Gene3D - 250 346 IPR012334 -
Bisa03g0316 402 SMART PMEI_2 30 185 IPR006501 GO:0004857
Bisa03g0316 402 SUPERFAMILY Pectin lyase-like 251 339 IPR011050 -
Bisa03g0316 402 PANTHER PECTINESTERASE 22 338 - -
Bisa03g0316 402 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 186 IPR035513 -
Bisa03g0316 402 CDD PMEI-like_3 37 186 - -
Bisa03g0316 402 FunFam Pectinesterase 36 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0316 Bisa-ChrBisa03 4227433 4230464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0316 14 338 Carbohydrate Esterase AT4G02330 47.321 4.67e-94 291