Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0315 ATGGCTTTCTGGCGCTTGTCCCTTGTTACAGTCTCGCTTACATTACTAGCATCGCTATCTTCTGCAGATAATGATGCAGCTTCCAGGGTTCCCCCAGAAACTATTTGCGACTCCACCCCTCACCCTTCTTACTGCAACTCCCTCCTAGCTAATCAAAACGGCACTGTCCATGACTATGGACGTATTTCTGTCCGAAAGTCCTTATCTCAGTCCAGAAGGTTTTCCAACTTAGTCGATTCATATCTCCAGTCTCCCTCCTCTCTCTCTCACTCCACAATCCAGGCTCTCCAAGACTGTCAATTCCTTGCTCAACTTAGCTTCGAATACCTATCCACCGCCTACCACCCTGTCAACAAATCCAGTGATTTTCTTCCAACTTCTGAAGCCGACGATCTTCAAACCCTGTTTAGCGCCGTTTTGACGAATCAAGAAACTTGCTTAGGCGGCCTACAAACGACAGCCTCAGACCCAAGAGTGAAGGACGACGTGTCCTCCATACTCTCAAACGACACCATGCTTCACAGCGTTTCTCTTGCTCTGTTCACCAAGGGTTGGGTGCCCCACAAGAACATCACAACATCATGGCCCACCAATGGCAGACATTTAGATTTCAGTAACGGTCGTTTGCCGTTGAGAATGTCGGGGAGAGTACAAGCCATTTACGACTCTGCAAGAAGCCACGGGAGAAAAATGCTTCAAAGCGACGACGACCAGAGTGTGGCGGTTAGCGACATTATAGTAGTCAGTCAGGACGGCAGCGGAAACTTCACCACCATCAACGACGCCATAGCTGCTGCCCCAAATAACACAGCAGCTAGTGACGGCTACTTCTTGATTTACATCACCGAAGGCGTGTATCAAGAATATGTATCCATAGCCAAGCAAAAGAAATACCTGATGTTACTCGGAGATGGAATCAACCGCACCATAATCACCGGGAATCGCAGTGTTGTGGATGGCTGGACAACATTCAACTCAGCAACCTTTGCTGTGGTGGCACAAGGGTTCGTAGCAGTGAACATAACATTCAGGAACACAGCAGGGCCAAGCAAGCACCAAGCAGTTGCTGTTCGAAGTGGAGCGGATTTGTGTACATTCTACAGCTGCAGCTTCGAAGGGTACCAAGACACTCTGTACACACATTCATTGAGGCAGTTTTACAGAGAGTGTGACATATACGGCACGGTTGATTTCATATTCGGAAACGCAGCCGTCGTTTTGCAGAACTGCAACATGTATCCTCGCTTACCAATGAGCGGGCAATTCAACGCCATAACAGCTCAGGGCCGAACCGACCCAAACCAGAACACAGGGACTTCCATACAGAACGCTACTATAAGAGCAGCTGATGATTTGGCTGGGAGTGTAGGGACGGTGAAGACGTACCTGGGGAGGCCATGGAAGGAGTATTCGAGGACAGTGTATATGCAGAGTTTCATGGACAGTTTGATAGACGCTTCTGGATGGATGGAGTGGGATGGAAATTTTGCGTTGGACACGTTGTACTACGCAGAGTATGATAACAGAGGACCTGGTTCGAATACGAGCGGGAGAGTGACGTGGGCTGGTTACCATGTGATCAATGCTACAGATGCAGCTAATTTCACAGTGTCTAATTTCCTAGTGGGAGAAGCTTGGCTGCCTCAAACTGGCGTTCCCTATTTGAGTGGATTGTAA 1677 0.4866 MAFWRLSLVTVSLTLLASLSSADNDAASRVPPETICDSTPHPSYCNSLLANQNGTVHDYGRISVRKSLSQSRRFSNLVDSYLQSPSSLSHSTIQALQDCQFLAQLSFEYLSTAYHPVNKSSDFLPTSEADDLQTLFSAVLTNQETCLGGLQTTASDPRVKDDVSSILSNDTMLHSVSLALFTKGWVPHKNITTSWPTNGRHLDFSNGRLPLRMSGRVQAIYDSARSHGRKMLQSDDDQSVAVSDIIVVSQDGSGNFTTINDAIAAAPNNTAASDGYFLIYITEGVYQEYVSIAKQKKYLMLLGDGINRTIITGNRSVVDGWTTFNSATFAVVAQGFVAVNITFRNTAGPSKHQAVAVRSGADLCTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNMYPRLPMSGQFNAITAQGRTDPNQNTGTSIQNATIRAADDLAGSVGTVKTYLGRPWKEYSRTVYMQSFMDSLIDASGWMEWDGNFALDTLYYAEYDNRGPGSNTSGRVTWAGYHVINATDAANFTVSNFLVGEAWLPQTGVPYLSGL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0315 558 FunFam Pectinesterase 239 558 - -
Bisa03g0315 558 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 183 IPR035513 -
Bisa03g0315 558 FunFam Pectinesterase 33 183 - -
Bisa03g0315 558 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 183 IPR035513 -
Bisa03g0315 558 PANTHER PECTINESTERASE 19 548 - -
Bisa03g0315 558 Gene3D - 239 558 IPR012334 -
Bisa03g0315 558 Pfam Pectinesterase 246 543 IPR000070 GO:0030599|GO:0042545
Bisa03g0315 558 Pfam Plant invertase/pectin methylesterase inhibitor 33 179 IPR006501 GO:0004857
Bisa03g0315 558 SUPERFAMILY Pectin lyase-like 240 557 IPR011050 -
Bisa03g0315 558 CDD PMEI-like_3 34 185 - -
Bisa03g0315 558 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Bisa03g0315 558 SMART PMEI_2 27 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0315 Bisa-ChrBisa03 4221337 4223110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0315 8 558 Carbohydrate Esterase AT1G02810 60.590 0.0 686