Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0314 ATGTATAACCTCAGAACTTCCAAATCCCCTTCGCTCCATCTTGTACCCGTTTTCTGTCTTCTCCTGCTGCTACTTCTCTTTTCTTTACCCCATTTCACCCCAAAATCAAAAACACACTTCCATCTTCACAAACACCTTCAAGTTGCTCACTCCACCTGCGAAGGAACCCTCTACCCAGCCCTCTGCGTCTCCACGCTCGCTTCCTTCCCAGATCTCGCCTCCAAATCCGTCCCAAAAATCATCTCCTCTGTTCTCAATTACACTGTGTTCGAGGTGAAATCCTCGTCCCGCAACTGCAGTGGTCTCCGACAGAGGCTCAGAAACCTAGACCCACTCCAACACAGAGCCCTCGATGACTGTCTCACGCTCTTCGACGACACTGTGGAGCAGCTCCACACCACCATTGCCGATCTCTCCACCACCGTCATAGGCTCCAAGCGCTACCATGACCTGCAGACTCTGTTAAGCGGGGCAATGACCAACTTGTACACGTGTCTGGATGGGTTTGCGTACGCCCAAGGGAATGTGAGGGACAAAATACAGGACAGGCTGTTCCAGATCTCTCGCCAAGTTAGTAACTCCTTGGTCATGCTCAAGAAAGTGCCTGCACTGAAGAAAACCTCCAGCTCTGAGGTCTTCCCTGAGTACGGCGACATGAAACACGGGTTTCCTTCATGGATGGTCTCTCGAGAACGAAAGCTGCTTGAGGGTACAGCGAATGAGACGAGATTCGATCTCGTGGTGGCCAAAGATGGCACAGGCAATTTTACCAGTATTGGGGAAGCAGTGGATGCAGCTCCTAACTCCAGCACAACCAGAATTGTGATACACATAAAAGCAGGGGCGTACTTTGAGAATGTGGAGGTGATCAAGAAAAAGACCAATTTGATGTTAGTTGGGGATGGAATTGGAAAGACAATTGTGAAAGGAAGTAGGAACGTCGTAGACGGATGGACCACTTATCAATCCGCCACTGTAGCTGTGAGAGGCGGGGGATTCATAGCAAAGGGCATAACATTTGAGAACTCGGCCGGACCGGAAAAGCACCAGGCCGTGGCCCTCAGGAACAGCGCCGACCTCTCTGCTTTCTACAAATGCAGCTTCGTCGGCTACCAAGACACCCTCTACGTGCATTCCCTCCGTCAATTCTACCGGGAATGCGACATCTACGGCACCGTCGACTTCATTTTCGGCAACGCCGCCGCGGTGTTCCAGAACTGCAACTTATACGCACGCAAGCCCAATGCCGATCAGAAGAACATGTTCACCGCTCAAGGCCGAGAGGACCCTAACCAGAACACCGGCATTTCAATCTTGAACTCCAAACTCGGTGCTGCTTCGGATCTGATTCCTTTTAAATCGTCTATCAAGAACTACTTGGGACGCCCTTGGAAGCCCTATTCCCGGACGGTGTTTATGAAATGTTACATGGAGGATGTGATTGAAGCGGCAGGGTGGTTGGAGTGGAACGGAACGGTGGGGTTGGAGACGCTGTATTACGGGGAGTATATGAATAAGGGTCCAGGTTCTAATACAGGTGCCAGAGTTAAATGGCCTGGTTATAGGGTCATCAACTCCTCCTCCGAGGCTACTCTCTTCACGGCTGGCCAATTCATTCAAGGCTATGACTGGTTGAATTCTACTCCCATTCCATTTTTCCTCAACTTGAGCTGA 1674 0.5078 MYNLRTSKSPSLHLVPVFCLLLLLLLFSLPHFTPKSKTHFHLHKHLQVAHSTCEGTLYPALCVSTLASFPDLASKSVPKIISSVLNYTVFEVKSSSRNCSGLRQRLRNLDPLQHRALDDCLTLFDDTVEQLHTTIADLSTTVIGSKRYHDLQTLLSGAMTNLYTCLDGFAYAQGNVRDKIQDRLFQISRQVSNSLVMLKKVPALKKTSSSEVFPEYGDMKHGFPSWMVSRERKLLEGTANETRFDLVVAKDGTGNFTSIGEAVDAAPNSSTTRIVIHIKAGAYFENVEVIKKKTNLMLVGDGIGKTIVKGSRNVVDGWTTYQSATVAVRGGGFIAKGITFENSAGPEKHQAVALRNSADLSAFYKCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAVFQNCNLYARKPNADQKNMFTAQGREDPNQNTGISILNSKLGAASDLIPFKSSIKNYLGRPWKPYSRTVFMKCYMEDVIEAAGWLEWNGTVGLETLYYGEYMNKGPGSNTGARVKWPGYRVINSSSEATLFTAGQFIQGYDWLNSTPIPFFLNLS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0314 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 50 201 IPR035513 -
Bisa03g0314 557 FunFam Pectinesterase 239 556 - -
Bisa03g0314 557 CDD PMEI-like_3 51 203 - -
Bisa03g0314 557 PANTHER PECTINESTERASE 27 546 - -
Bisa03g0314 557 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Bisa03g0314 557 SUPERFAMILY Pectin lyase-like 244 554 IPR011050 -
Bisa03g0314 557 NCBIfam pectinesterase inhibitor domain 20 200 IPR006501 GO:0004857
Bisa03g0314 557 SMART PMEI_2 44 197 IPR006501 GO:0004857
Bisa03g0314 557 Pfam Plant invertase/pectin methylesterase inhibitor 50 195 IPR006501 GO:0004857
Bisa03g0314 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 202 IPR035513 -
Bisa03g0314 557 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Bisa03g0314 557 Gene3D - 240 556 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0314 Bisa-ChrBisa03 4210976 4216004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0314 73 556 Carbohydrate Esterase AT4G02320 53.106 0.0 539