Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0308 ATGTGTGGCGGTGCTATCATCGCTGACTTCATCCCTCGCCACCGTGGCCGCCGCCTTACCGCCTCCGACCTCTGGCCTAACTCCTTTGGTAAGCGCAATGATTTCGAGTTCGATTTCTCTCAACTCGACCGCTCCCAGGACCACTCTACCCTCGTGAAATCATCCCATCCTCCCCCAGTTGATGAGCAAGCTGAGAAGCCCGTCAAGAGGCAGAGGAAGAATCTCTACAGAGGGATCCGACAACGGCCGTGGGGCAAATGGGCTGCTGAGATTCGCGACCCCAGAAAGGGCGTTCGTGTTTGGCTTGGAACCTTCAACACTGCTGAAGAAGCCGCTAGGGCCTATGACAGAGAAGCCAGAAAAATCCGCGGCAAGAAAGCCAAAGTCAATTTCCCCAACGAAGACGACGCCTACTCCGTTCAAGCTCGTCGTAATCCACCTCCTCCACTCCCACAACGCATTCCTCGCCTCTATCCACACCAATACGGATCTATTTCAAATAATGTCTCTAAGAGCTTCAATTTGGAGTTTGGCTACGATCTTAACCAAGTCGGAACAATTCCTTCCATAGGTGCTTTCGACACTGACCCACTTGTTATTTCTGGGGATGAACACTCTGGATGTGGTTCAGGATCAGGGTCAGAGGGTGCCTACTCCACTGTAGAGTTCATGGGCTCGAATCAGAATGTGAACAGCTATTTTTCTCAGGGATCGAATGTGGAGGAGAAAGAGGCAGAGCAGGAAGCGAAAGTGAACAAGATAGTGATGGATGCAGAGGAAGAAGAGAACGAGATAAAGAAGCTATCGGAGGAGCTGATGGCGTACGAGAATTACATGAAGTTTTATCAGATTCCATACTTTGATGGGCAATCTACAGCACCCAATAACGTTCAGGAAAGCGTGGTTGGTGATCTCTGGAGCTTCGACGATGAGGCCATTCCTTAA 945 0.5048 MCGGAIIADFIPRHRGRRLTASDLWPNSFGKRNDFEFDFSQLDRSQDHSTLVKSSHPPPVDEQAEKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDAYSVQARRNPPPPLPQRIPRLYPHQYGSISNNVSKSFNLEFGYDLNQVGTIPSIGAFDTDPLVISGDEHSGCGSGSGSEGAYSTVEFMGSNQNVNSYFSQGSNVEEKEAEQEAKVNKIVMDAEEEENEIKKLSEELMAYENYMKFYQIPYFDGQSTAPNNVQESVVGDLWSFDDEAIP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0308 314 PANTHER DNA-BINDING DOMAIN 55 257 IPR044808 GO:0003700|GO:0009873
Bisa03g0308 314 MobiDBLite consensus disorder prediction 46 70 - -
Bisa03g0308 314 Gene3D AP2/ERF domain 75 133 IPR036955 GO:0003700|GO:0006355
Bisa03g0308 314 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Bisa03g0308 314 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Bisa03g0308 314 FunFam Ethylene-responsive transcription factor 2 74 133 - -
Bisa03g0308 314 Pfam AP2 domain 76 124 IPR001471 GO:0003700|GO:0006355
Bisa03g0308 314 CDD AP2 76 133 IPR001471 GO:0003700|GO:0006355
Bisa03g0308 314 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Bisa03g0308 314 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Bisa03g0308 314 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Bisa03g0308 314 Coils Coil 244 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0308 Bisa-ChrBisa03 4081426 4082454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0308 1 133 AP2-EREBP Transcription Factor Family AT3G16770 57.971 2.79e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g0308 AP2 9.5e-13 CL0081