Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0299 ATGCCCGGCGATACTCACACCCCTAATCCCAAGGTTCTCCTCTGCAATGCTGGGGCAGGTGCAGCTGCCGGAGTTATTGCTGCTACATTTGTATGCCCTTTAGATGTCATCAAAACTAGGTTTCAGGTTGGGCTGCCACAGCTCGCTAATGGAAGTGTTAAAGGTAGTCTGATAGTCGGTAGTTTGGAACAAATATTTCACAAGGAGGGGCTGCGGGGCATGTACCGTGGGCTGGCTCCTACTGTCCTGGCGTTACTTCCAAATTGGGCGGTTTATTTTACTATATATGATCAGCTCAAGAGCCGTCTCTGTACTGATGGTGAAGTCTATCATCTTTCAGTTGGAGCTAACATGATAGCTGCTTCTGGTGCTGGGGCTGCAACTATCATTGCTACAAATCCACTTTGGGTTGTCAAGACTCGACTTCAGACTCAGGGAATGAGACCTTGTATTGTGCCATATAGGAGTACACTATCCGCATTGAGGAGAATTGCTCATGAGGAGGGTATTCGGGGCTTGTACAGTGGCCTTGTACCTGCACTGGCTGGTATCAGTCATGTTGCCATCCAGTTTCCAACGTATGAGAAAATAAAATTCTATTTGGCAAAGCAAGATGACACAGCAATGGATAAGCTTGGTGCACGTGATGTTGCCATTGCCTCATCAGTCTCCAAAATTTTTGCATCCACATTGACTTATCCTCACGAGGTTGTACGGTCTAGACTGCAAGAACAAGGACACCACTCTGAAAAACGGTACTCTGGTGTAATGGACTGTGTAAGAAAATTATATCAGCAAGACGGCATACCGGGCTTTTACCGTGGTTGTGCGACCAACCTTCTGAGGACAACGCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATACATCGGTTTCTTGTTTCACTATACCCTTGTGACTCACGGTCTCATATTGTGACGGTAGATCATGAGTAA 960 0.4646 MPGDTHTPNPKVLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVGLPQLANGSVKGSLIVGSLEQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYDQLKSRLCTDGEVYHLSVGANMIAASGAGAATIIATNPLWVVKTRLQTQGMRPCIVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLAKQDDTAMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVMDCVRKLYQQDGIPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLYPCDSRSHIVTVDHE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0299 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 300 IPR018108 -
Bisa03g0299 319 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 14 304 IPR044712 GO:0006862|GO:0055085
Bisa03g0299 319 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Bisa03g0299 319 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Bisa03g0299 319 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Bisa03g0299 319 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Bisa03g0299 319 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085
Bisa03g0299 319 Gene3D Mitochondrial carrier domain 108 305 IPR023395 -
Bisa03g0299 319 Gene3D Mitochondrial carrier domain 3 107 IPR023395 -
Bisa03g0299 319 FunFam NAD+ transporter 108 305 - -
Bisa03g0299 319 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 3 107 - -
Bisa03g0299 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 102 IPR018108 -
Bisa03g0299 319 Pfam Mitochondrial carrier protein 111 204 IPR018108 -
Bisa03g0299 319 Pfam Mitochondrial carrier protein 16 104 IPR018108 -
Bisa03g0299 319 Pfam Mitochondrial carrier protein 218 302 IPR018108 -
Bisa03g0299 319 SUPERFAMILY Mitochondrial carrier 15 296 IPR023395 -
Bisa03g0299 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0299 Bisa-ChrBisa03 4006980 4011585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0299 1 311 Chloroplast and Mitochondria Gene Families AT2G47490 77.244 8.99e-168 467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0299 03 4006980 4011585 Bisa03g0299 03 4006980 4011585 ECH