Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0296 ATGGCAACCAGAAATCGGACTGTCCTGTTCAGAAAGCACAGAGACGCTGTCAAGAGCGTGCGCGCCCCTTTGTCTTCCTCAGCATCTGGTTCCGGCGGCGCTGTCATTGAAATGGTGAACACTTCACTTCTTCGTTCCAACCAATCTTCTTATGCTCCTCTAAGCACCGAAGATCCAGGTCCCTCCAGAGATGCATTTACTGTGGGCTTGCCGCCAGATTGGGTGGATGATTCTGAAGAAATAGCTGCAAACATACAACGAGCTCGGGTTAAAATGTTTGAGCTAGTCAAACTTCATGGAAAGGCGTTAATGCCCTCCTTTGGTGATGACAAAGAAGATCAACATCAGATTGAGACTCTTACCCAGGAGATTACAACTGTTTTGAGAAAATCTGAAATTAAGTTAAAAAGACTTTCTGCTGATAGAGGGTCCTCTGAGGATTCAAATGTCAGAAAAAATGTGCAGCGCTCCCTTGCTACAGATCTTCAGAACCTCTCAATGGACCTCCGGCGTAAGCAGTCAACATACTTGAGACGGTTGCAGCAGCAAAAAGAGGGTTACGATGGGGTTGACTTGGAGATGAACTTGAATGGGAATAAACTTGGTTTGCAAGATGATGAATTTAGTACTGTGGTCACCAAATCAGTGAACGAACTGGCCCAGATCATGAAGGATCTCTCTGTTCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAGTGTTGCTACATCCGTTGAAGAGGGCTTTAAGCAGTTGGAAAAGTTTGAACATGTTCTTGCAGGCAGAGAGAACGCAGAAAAAAGGAGGAATGGTTATGTGTGCAACAGTGCTTGTTATAATGTGCCTCATCATGCTAGTCCTCTTGATACTCAAGGAGATATTATTTTAGTCATACATTTCATTGTTGATGGAACTGCTTTGCCTACTAGTTGTCGTGCTCATTACGTCCTTGGGCCATGGGGGATTAATTCGCCTTCTATTTGA 1002 0.4421 MATRNRTVLFRKHRDAVKSVRAPLSSSASGSGGAVIEMVNTSLLRSNQSSYAPLSTEDPGPSRDAFTVGLPPDWVDDSEEIAANIQRARVKMFELVKLHGKALMPSFGDDKEDQHQIETLTQEITTVLRKSEIKLKRLSADRGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYLRRLQQQKEGYDGVDLEMNLNGNKLGLQDDEFSTVVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATSVEEGFKQLEKFEHVLAGRENAEKRRNGYVCNSACYNVPHHASPLDTQGDIILVIHFIVDGTALPTSCRAHYVLGPWGINSPSI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0296 333 SMART SynN_4 65 181 IPR006011 GO:0016020
Bisa03g0296 333 CDD SNARE_syntaxin16 205 260 - -
Bisa03g0296 333 SMART tSNARE_6 194 261 IPR000727 -
Bisa03g0296 333 PANTHER SYNTAXIN 77 260 IPR045242 -
Bisa03g0296 333 Gene3D - 71 207 - -
Bisa03g0296 333 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 199 261 IPR000727 -
Bisa03g0296 333 Gene3D - 211 263 - -
Bisa03g0296 333 SUPERFAMILY t-snare proteins 70 254 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0296 Bisa-ChrBisa03 3967436 3971367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0296 1 262 SNARE and Associated Proteins AT4G02195 64.605 4.82e-119 344
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0296 03 3967436 3971367 Bisa03g0296 03 3967436 3971367 ECH
Bisa03g0296 03 3967436 3971367 Bisa07g1464 07 37442509 37446275 ECH