Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0287 ATGTCTGACTATTATCCCAATCCTACTTCTTCATCACCTCCAAAACTTTTTGGTTTCCCACTGACAGAGGAAGAATTTGGAGAAAGAAAATATGATGTGATGATGAGAGAAGACAGAAGATTCAAGTGCCAGTATTGCCAGCGAGCATTCGCAAACTCGCAGGCCTTAGGGGGTCACCAAAATGCACACAAGAGAGAACGCGAGAGAGCGAGGCGTTTCCACATCCTCAACGATCACAAGCGCTTCATGGCGGCTTCACCTCTTCTCTCTCCACATTCTCTCACTCTACCCAACACCTTTCACTCTGCAAAATCCAATGGAAACAACAATGTTAATCCTGCGATTCTACCAAACATAAAAGGCTTCCCATCAAGGTCGATTCTGAGATCGAGGTTTCCTTTTCAGTTTTATGGGTCGTCCTCCCCACTGCAATCTGCTGATACTAGTAGTACTGTTGAGGAATTAAGATCCACTTCTGCTAAACTCCCACACAGGGATGTAGGCGTGAGTGTTGATGTCCATCTTAAATTGTCTCTCTCAGATTAG 546 0.4487 MSDYYPNPTSSSPPKLFGFPLTEEEFGERKYDVMMREDRRFKCQYCQRAFANSQALGGHQNAHKRERERARRFHILNDHKRFMAASPLLSPHSLTLPNTFHSAKSNGNNNVNPAILPNIKGFPSRSILRSRFPFQFYGSSSPLQSADTSSTVEELRSTSAKLPHRDVGVSVDVHLKLSLSD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0287 181 Gene3D Classic Zinc Finger 28 88 - -
Bisa03g0287 181 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Bisa03g0287 181 SUPERFAMILY beta-beta-alpha zinc fingers 38 68 IPR036236 -
Bisa03g0287 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Bisa03g0287 181 PANTHER ZINC FINGER PROTEIN 5 10 179 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0287 Bisa-ChrBisa03 3816993 3817538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0287 9 98 C2H2 Transcription Factor Family AT1G67030 42.056 4.50e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa03g0287 None None None