Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0270 ATGAATCTTCGCTTGTCAATGATCTTCCGCCCTTCCTCTGCTATCTTCTTCCTGGCACTTGCTGCACTCATAGTTCTCTTATCATTGACGCCATGCTGGTATGTTATGGTTAGACATATCGAGCAACGTGTGAATTCAAACTCTCAAAATCTTCTCTCGAAAATTCAATCTGAAATTCGCCACTCCACCGAACGGTTGCACCCAATGAATTCATCATCCACCAATTTAGCAAGGCTTCTGAGTTCAACCTTCAATCAGACTAATATCTCATTCTCTGACATTCAGACAAAGGTAGCTCCAATGTTATTTCAAGCATTTGAGACAGTTCCCCATCTAACTGAAATCTCATACATTGGGATGGAAGGTTTCTTTTTCTCATACTACAGAGATCACACTCAAGCTCTTGCATTGTACTCTAACTCTTCCTTTTCTTCTATATCGGGTGCTTCAAAAAAGGTATACTATGTCCAACATGTAAATCCTGACACAGGAGGATTATATGGGGAAGCCACAATATATGAATACCCTGTTAATGTAACTTGGATCGAGAAAGTAGTTAATAGTTCATATGGTTATGCTTCATTGGGGTCCAAGTGGAGCGAAAACGACAACATTTTATTCCTGAGTTCAGCGAGAATCTCAAAAACAAGAGTAATCTCTTTAGGGTTTTCAGCAACATCAATTCTTGATTTTGTCACTCATATTGGGCATCAAGGTGAAGGCTTGTATTTGGCAACTAAAGATGGGATAGTGCTTATCCCAGGAATCCAACATACCCATATAGTATTCTCTAACGATATGGCTTCCTTCCAATCAGTGAAACCAATTAATGATAATCAATTTAGTTACGAGGGCACTATCTCATGCAAGGATGAAGACTCTGCTTCTCCTTTGAAAATTGAGGATACACAGTATTTGGCAAGCTGCTCGTCAATTGATATAATGGGAGTAGACTTGGTGTACGTTTTGGCTGTCCCACAAGATGAATTAGTCAGCTTTGTTCACAAAAGTACTAAACATGCGTTGATGCTATTGATTGTGATGATAGTGATGATATTAATCTCTATTTTCAATTTTGTGGTGTTAAATGCCATAGTGGGTCGGCGAGAGATGCAATTGTGTGCTTCTCTCATCAAACAAATGGAAGCCACTCAACAAGCTGAGAGGAAGAGTATGAATAAGAGCCTTGCTTTTGCTAGTGCTAGCCATGATGTTCGTAATTCTCTTGCTGGCCTTACTTGTTTGATCGAGAAGTCCTTTGAAGAAGTTACCCCTGGTTCAGAACTAGATATCAGCTTAAAACAAATGGATGCTTGTACAAAAGACTTACTGGGGGTATTGAATTCTATTATGGATACAAGCAAAATTGAGGCTGGGAAAATGCAGCTCGAGGAAGAGGAATTTGATCTATTTCAACTTATAGAAGATGTAGTTGACTTATTCCATCCTGTGGCTATGAGAAAACGTGTAGATCTTGTATTAGACCACTGTGATGGTTCTGTCATTAGATATTCACGCGTTAATGGGGATAGAGGAAAGCTTCTGCAAGTTTTGAATAATTTAGTGAGCAATGCTGTTAAATTTACTGATGAGGGACATATAGCCGTCCGAGCTTGGGCTCAGAAACCAAGTTTCCAGAACTCAATGATCGCTTCTGACAGATACAGTTGCATGAAGCGTTTGTCATGTTTATTTTACAAGAAAAATGGGGCAAATATTGATCAAGAAGCTGTGAATTCAATCCAACAAGATCTAAATTACTTAGATTTTGTGTTTGAAGTGGATGATACGGGAAAAGGAATTCCTAAAGATAAGCAGAATTCTGTGTTTGAGAATTATGTTCAAGTCAAAGAAACTGCTCTAGGAAAAGGAGGCACTGGCTTGGGACTTGGTATTGTGCAATCACTGGTACGTTTGATGCATGGAGATATTGGAATTGTGGACAAGGACATTGGAGAAAAAGGAACTTGCTTCAAATTCAACGTCCTCCTTACAGTATGTGAGACATTCACAGGTGGTAGTAGCACAAGGGAAGGTAATAGTTTAGGAGGTGAAAGAAATCTTAGTCAACCTCAAGTACTAGACATCCACACCCCTACTTCTGGTTCTAGCATTTGTTCACCTAGTCCCAGATTACCTATTTTCACATCTAGTAGGGCAGAGTCTTCTTGCGTTGTTCTTTTGATTCAAGGTGAGGTACGTCGAAGGATTACACGAAGGTTCATGGAGAGCTTAGGGATTAAAGTTAAAGTAGTGAAGAAGTGGGAAAATTTGTTTCACACTCTCAAGAAGATCAAGCAAACAGGACGTCATTCGAGCCAAAGCTCCATAGGAACATCAGATATGAGCTCTCGATCTACGTCTCAAAATTCTAATGCCAGAGCCAAAGGGGTTCCTTTGAGTACTGTGGATGGAAATGACTATGTCCCTTCAGTTTTCAAGAAGACAGATGATGGAACTTCCCCAGGTTTCATTCTGCTTGTGATTGATGCAATCGCAGGACCCTTTTCAGAAGTTGGCAGAGTGGTATCTGAGTTCAGAAGAGGCAGTGGAAATCCTTGTAAGGTTGTTTGGTTGAACAAGTCACTCATCCATGATGTCAAATTGAAAGCAGTCAATGAAGATGTGTTTGACCCAGATGACATTATCATGTCCAGACCATTTCATGGTACTCGTTTGATTGAGGTTGTAAGGCTTCTTCCTGAGTATGGGGGTAATTGGCCAAGTAATTCCAGAAGAGTAAAGAGGGACATTTTTCATGACAGACTTAAAAAAACTTATGGAGACGCACATCCATTTCAAGATGTACAAAAACATGAGTATGGAAGTTCAAGGAGTGAACAACTGTATTCTCATGTTGAAGAGGGTCTGTCTGGGAGTTTCCCCAATCTTCCTTATGATTACATCTTAATGGATTGTGAGATGCCGTTAATGGATGGATTTGAGGCAACAAGGCGAATAAGGGAGATGGAGAAAGGATACGGTGTTCGCATACCTATTATTGCATTAACAGCTCATACGTCAGGGAAAGAGACGAAAATGACGATAGAAGCTGGAATGGACGTTCATTTAGGGAAGCCATTGAAAAAAGAGCATTTACTAGAAGCTATTAGATACATACACACTTCATCTTCAGTGGGAGTTATGATGGAAGCTGAACCATGTGATGACGTGACTCCTAAGCCTCAGGTTAAGGCTACACTTCGCCTTGGCACAGAATTATATTCTGTTGAGGCAGACAGAGGTTGTCTCTCAGAGCAATTAGTCTCATTTAAAGAGAAAAGCATGATTTTATTGAAGGATTTTATTACAAAGAATAATGTTCCTCAGGATGTCCCTGATGACTTAGTTGAAACTTCGTCAGAAGATGACGATGATATTCCTGAGGAGCCGAGCATTAAGTCTAAAAAATCTAAACTGACATAG 3426 0.399 MNLRLSMIFRPSSAIFFLALAALIVLLSLTPCWYVMVRHIEQRVNSNSQNLLSKIQSEIRHSTERLHPMNSSSTNLARLLSSTFNQTNISFSDIQTKVAPMLFQAFETVPHLTEISYIGMEGFFFSYYRDHTQALALYSNSSFSSISGASKKVYYVQHVNPDTGGLYGEATIYEYPVNVTWIEKVVNSSYGYASLGSKWSENDNILFLSSARISKTRVISLGFSATSILDFVTHIGHQGEGLYLATKDGIVLIPGIQHTHIVFSNDMASFQSVKPINDNQFSYEGTISCKDEDSASPLKIEDTQYLASCSSIDIMGVDLVYVLAVPQDELVSFVHKSTKHALMLLIVMIVMILISIFNFVVLNAIVGRREMQLCASLIKQMEATQQAERKSMNKSLAFASASHDVRNSLAGLTCLIEKSFEEVTPGSELDISLKQMDACTKDLLGVLNSIMDTSKIEAGKMQLEEEEFDLFQLIEDVVDLFHPVAMRKRVDLVLDHCDGSVIRYSRVNGDRGKLLQVLNNLVSNAVKFTDEGHIAVRAWAQKPSFQNSMIASDRYSCMKRLSCLFYKKNGANIDQEAVNSIQQDLNYLDFVFEVDDTGKGIPKDKQNSVFENYVQVKETALGKGGTGLGLGIVQSLVRLMHGDIGIVDKDIGEKGTCFKFNVLLTVCETFTGGSSTREGNSLGGERNLSQPQVLDIHTPTSGSSICSPSPRLPIFTSSRAESSCVVLLIQGEVRRRITRRFMESLGIKVKVVKKWENLFHTLKKIKQTGRHSSQSSIGTSDMSSRSTSQNSNARAKGVPLSTVDGNDYVPSVFKKTDDGTSPGFILLVIDAIAGPFSEVGRVVSEFRRGSGNPCKVVWLNKSLIHDVKLKAVNEDVFDPDDIIMSRPFHGTRLIEVVRLLPEYGGNWPSNSRRVKRDIFHDRLKKTYGDAHPFQDVQKHEYGSSRSEQLYSHVEEGLSGSFPNLPYDYILMDCEMPLMDGFEATRRIREMEKGYGVRIPIIALTAHTSGKETKMTIEAGMDVHLGKPLKKEHLLEAIRYIHTSSSVGVMMEAEPCDDVTPKPQVKATLRLGTELYSVEADRGCLSEQLVSFKEKSMILLKDFITKNNVPQDVPDDLVETSSEDDDDIPEEPSIKSKKSKLT 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0270 1141 Gene3D - 932 1044 - -
Bisa03g0270 1141 SMART REC_2 934 1037 IPR001789 GO:0000160
Bisa03g0270 1141 PRINTS Bacterial sensor protein C-terminal signature 624 642 IPR004358 GO:0016310|GO:0016772
Bisa03g0270 1141 PRINTS Bacterial sensor protein C-terminal signature 590 604 IPR004358 GO:0016310|GO:0016772
Bisa03g0270 1141 PRINTS Bacterial sensor protein C-terminal signature 608 618 IPR004358 GO:0016310|GO:0016772
Bisa03g0270 1141 SUPERFAMILY CheY-like 952 1040 IPR011006 -
Bisa03g0270 1141 SMART HisKA_10 393 459 IPR003661 GO:0000155|GO:0007165
Bisa03g0270 1141 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 381 461 IPR036097 GO:0000155|GO:0007165
Bisa03g0270 1141 SMART HKATPase_4 509 666 IPR003594 -
Bisa03g0270 1141 Gene3D - 461 670 IPR036890 -
Bisa03g0270 1141 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 448 661 IPR036890 -
Bisa03g0270 1141 Pfam Response regulator receiver domain 962 1038 IPR001789 GO:0000160
Bisa03g0270 1141 CDD REC_hyHK_CKI1_RcsC-like 965 1037 - -
Bisa03g0270 1141 MobiDBLite consensus disorder prediction 769 797 - -
Bisa03g0270 1141 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 664 IPR003594 -
Bisa03g0270 1141 MobiDBLite consensus disorder prediction 769 799 - -
Bisa03g0270 1141 Gene3D - 376 460 - -
Bisa03g0270 1141 ProSiteProfiles Histidine kinase domain profile. 400 666 IPR005467 -
Bisa03g0270 1141 ProSiteProfiles Response regulatory domain profile. 910 1041 IPR001789 GO:0000160
Bisa03g0270 1141 MobiDBLite consensus disorder prediction 1107 1141 - -
Bisa03g0270 1141 PANTHER TWO-COMPONENT HISTIDINE KINASE 29 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0270 Bisa-ChrBisa03 3613996 3620851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0270 1 905 Histidine Kinase Gene Family AT2G47430 40.943 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa03g0270 HATPase_c 4e-24 CL0025