Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0268 ATGAAAGGCCTGGACTTCGACGCCGATAGAGCTCTGGCGAAGGAGTTCCTTTCGAACTTCGCAGATGTAAATGGTGAAGCGAAATACATGAACATTTTGCAAGAAGTTGCAAACCACAAAACTCGAGCAATCCAGATCGATATCGGGGACTTAATTAATTACAAAGATTTAGACGAAGAATTTCTCAGACGAGTAACTGAAAACACTCGGAGGTATATTGGAATTTTTGCTGATGCAATCGACGAACTCATGCCAGAGCCCACTGAGGCTTTTACGGATGATGATCATGACATACTGATGACGCAGAGATCTGACGAAGGGGCAGAAGGTGCTGATGGTTCAGACCCTCTTCAGAAGATGCCTTCTGAGATCAAGCGCTACTTTGAAGTTTATATTAAGGCATCTTCAAAAGGACGACCATTTACTATTAGGGAGGTGAAGGCTTCATACATTGGTCAGCTTGTAAGGATATCTGGTATTGTCACACGTTGTTCGGATGTTAAACCATTGATGCAGGTAGCCGTATACACATGTGAGGATTGTGGTTTTGAAATTTACCAGGAAGTAACAGCTCGAGTCTTCATGCCTTTGATTGAGTGTCCCTCTAAGCGCTGTAATACAAATCGAAGTAAGGGGAACCTCATCCTTCAACTAAGAGCATCGAAGTTTTTGAAATTTCAAGAGGCAAAAATTCAAGAATTGGCTGAACATGTTCCAAAAGGCCATATTCCCCGAACAATGACAGTCCATTTTAGGGGAGAGCTCACGAGAAAGGTGGCTCCAGGTGATGTTGTTGAATTGTCTGGCATTTTTCTTCCTATACCTTATACTGGTTTTAGAGCAATGCGTGCTGGCCTAGTTGCCGATACTTACTTAGAAGCCATGTCAGTTACCCATTTCAAGAAAAGATATGAAGAGTATGAATTTATAGGAGATGATGAAGAGCAGATATCAAAACTAGCTGAAGACGGTGACATCTACAATAAGTTGGCTCGATCATTGGCTCCTGAAATTTTTGGACATGAAGATATCAAGAAAGCATTGCTTCTTCTCCTTGTTGGTGCTCCCCACCGAAAGTTAAAAGATGGGATGAAGATAAGAGGAGATTTACATATATGTCTGATGGGCGATCCTGGTGTTGCAAAGAGTCAGCTCCTTAAACACATAATCAGTGTAGCACCAAGAGGGGTGTACACCACTGGCAAAGGAAGTAGTGGTGTAGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTGACAAATGAGATGGTTCTGGAAGGGGGAGCATTGGTGCTAGCAGACATGGGTATTTGTGCCATTGATGAGTTTGACAAGATGGATGAATTGGATCGTACAGCTATACATGAAGTTATGGAACAGCAAACTGTTAGCATTGCCAAGGCTGGGATCACTACATCACTGAATGCAAGGACTGCTGTCCTTGCTGCAGCCAATCCAGCATGGGGGAGATATGATCTACGGAGAACTCCAGCTGAAAACATAAATCTTCCTCCTGCCCTGCTATCAAGATTTGATCTGCTGTGGTTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCAAGGCACGTTGTATACGTCCACCAAAATAAAGAATCTCCTGCTCTGGGATTCACTCCTCTTGAACCATCTGTTCTCCGAGCGTATATATCAGCTGCAAGAAGATTTTCTCCTAGTGTCCCAAGGGAACTGGAGGAGTATATTGCTAGTGCATACTCCAGCATTCGCCAAGAAGAAGCCAAGTCTAATACTCCCCATTCCTATACAACTGTCAGAACTTTGCTCAGCATTCTCCGCGTATCAGCTGCACTAGCAAGACTCCGATTTTCAGAAACTGTTGCTCAGAGTGATGTGGATGAGGCACTGAGGTTAATGCAGATGTCGAAGTTCTCTTTGTACTCTGATGAGCGTCAAAGATCTGGTCTGGATGCCATATCTGATATCTATTCTATACTGCGAGATGAAGCTGCTAGGAGTAACAGGATGGATGTAAGCTACGCCCACGCACTCAATTGGATATCTCGGAAGGGTTACAGCGAAGCACAATTGAAAGAGTGTTTGGAGGAATATGCAGCATTAAATGTTTGGCAGATACACCCCCACACTTTTGATATCCGATTTATCGATGCTTGA 2157 0.4349 MKGLDFDADRALAKEFLSNFADVNGEAKYMNILQEVANHKTRAIQIDIGDLINYKDLDEEFLRRVTENTRRYIGIFADAIDELMPEPTEAFTDDDHDILMTQRSDEGAEGADGSDPLQKMPSEIKRYFEVYIKASSKGRPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVAVYTCEDCGFEIYQEVTARVFMPLIECPSKRCNTNRSKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKKRYEEYEFIGDDEEQISKLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIISVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDELDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISAARRFSPSVPRELEEYIASAYSSIRQEEAKSNTPHSYTTVRTLLSILRVSAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEAARSNRMDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDIRFIDA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0268 718 Pfam MCM AAA-lid domain 553 636 IPR041562 -
Bisa03g0268 718 Gene3D - 143 271 IPR012340 -
Bisa03g0268 718 ProSiteProfiles MCM family domain profile. 326 532 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 SUPERFAMILY Nucleic acid-binding proteins 13 294 IPR012340 -
Bisa03g0268 718 ProSitePatterns MCM family signature. 435 443 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bisa03g0268 718 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 14 647 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 Pfam MCM P-loop domain 313 536 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 Gene3D - 9 101 - -
Bisa03g0268 718 Gene3D - 170 224 - -
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 367 382 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 455 468 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 479 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 427 441 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 506 514 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 Pfam MCM OB domain 143 273 IPR033762 -
Bisa03g0268 718 Pfam MCM N-terminal domain 14 133 IPR027925 -
Bisa03g0268 718 FunFam DNA replication licensing factor MCM7 311 643 - -
Bisa03g0268 718 SMART mcm 139 638 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bisa03g0268 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 645 IPR027417 -
Bisa03g0268 718 CDD MCM7 329 636 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bisa03g0268 718 FunFam DNA replication licensing factor MCM7 170 224 - -
Bisa03g0268 718 FunFam DNA replication licensing factor MCM7 9 100 - -
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 120 132 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 158 169 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 285 295 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 193 205 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bisa03g0268 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 176 187 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bisa03g0268 718 Gene3D - 311 643 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0268 Bisa-ChrBisa03 3586677 3592671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0268 1 716 Core DNA Replication Machinery Family AT4G02060 85.056 0.0 1277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0268 03 3586677 3592671 Bisa03g0268 03 3586677 3592671 ECH