Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0260 ATGGATGGTACTGGCTCCACAAAACTTGAGTCAGAAGCATCTCCAGAGCTCAGAACAGATGAAGCTCAAGCCCTCAAAAAACGGAAAACGGTTGAGAAAACAGTTGTGAGAGTGAGAATAGGAGAAAATGTTAGCAAACTGAAGAACGAAGGGCCACCTTCTGATTTCTGGTCATGGAGGAAATATGGACAAAAGCCTATCAAAGGATCTCCTTATCCAAGGGGTTATTACAGATGCAGCACATCCAAGGGTTGTTCAGCGAAAAAGCAAGTAGAGCGATGCAGAACAGATGCTTCAGTGCTTATCATTACTTATACCTCTTCTCATAACCATCCAGCTCCTGATCCACCCTCCTCTTCTAATCCAACCCCACAACCACAAGAATCCCAAAATCAAACCCCTCAAGATCTTCCAGCTACCTCCAAACTGGAAAACCAACAAGAAGAAGAAGAAAAAGAAGGGAAAAAGAATCATAAGCCCGCCACCCCCAGTGGTCAATGTGCAAACGCAGAAAGTTTTCATTACTTAGAATCGCCAATACCGTGCTCTGAGGACATTATTGTTGACCAACGAGATCCTTTCGAGTTGAACCCAGAGAAAACCCATGGGAGAGTAGATGTTCTCTTGGAGAAAGAGCCTGTGCCTCTCTGTTATTCTCAGTTCCAGAACTTGTCCACACCCACATCAGAAGAACACGACTTTTTTGATGAGCTTGAAGAGCTACCCATATCTTCACCTTTCTTAAACTTCACGAGGAGCAATTTTTCTGAGGAAAGGATTGCGGTTGCCCCTTCTTGA 798 0.4424 MDGTGSTKLESEASPELRTDEAQALKKRKTVEKTVVRVRIGENVSKLKNEGPPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASVLIITYTSSHNHPAPDPPSSSNPTPQPQESQNQTPQDLPATSKLENQQEEEEKEGKKNHKPATPSGQCANAESFHYLESPIPCSEDIIVDQRDPFELNPEKTHGRVDVLLEKEPVPLCYSQFQNLSTPTSEEHDFFDELEELPISSPFLNFTRSNFSEERIAVAPS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0260 265 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0260 265 MobiDBLite consensus disorder prediction 13 27 - -
Bisa03g0260 265 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 20 247 IPR044810 GO:0003700
Bisa03g0260 265 MobiDBLite consensus disorder prediction 1 27 - -
Bisa03g0260 265 MobiDBLite consensus disorder prediction 103 170 - -
Bisa03g0260 265 Gene3D WRKY domain 39 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g0260 265 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0260 265 SUPERFAMILY WRKY DNA-binding domain 49 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g0260 265 ProSiteProfiles WRKY domain profile. 54 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0260 265 MobiDBLite consensus disorder prediction 124 142 - -
Bisa03g0260 265 FunFam WRKY transcription factor 65 33 114 - -
Bisa03g0260 265 MobiDBLite consensus disorder prediction 143 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0260 Bisa-ChrBisa03 3541973 3543047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0260 26 114 WRKY Transcription Factor Family AT3G58710 67.391 5.92e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa03g0260 WRKY 5.4e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0260 03 3541973 3543047 Bisa03g0260 03 3541973 3543047 ECH