Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa03g0256 | ATGAGGGCGGCGCCGCCTCCGCAGCCAAAGGAGAAGGCAGAGGACAGGTATAGAGATGATGACGAGGACGACCCGATGGAGAGTTTCTTGAGGGCGAAGAAGGACGTAGGGTTGACTCTGGCATCCGAGGCTCTGCAGGCTGGATACAATTCCGACGAAGAAGTTTATGCTGCTGCGAAGGCTGTAGACGCGGGAATGTTAGAGTATGATTCTGACGACAATCCCATTATTGTTGACAAGAAGAAAATTGAGCCGATACCTGCTTTGGATCATAGTTCCATTGAGTACGAGCCCTTTAACAAGGATTTTTACGAGGAGAAACCTTCAATATCAGGCATGATGGAGCAAGATGTTGCTGAATACCGGAAGAGTTTGGCCATTCGGGTATCAGGCTTTGATGTTCCAAAGCCAATCAAGACATTTGAAGACTGTGGTTTCTCTCCACAAATTATGAGTGCCATAAAGAAGCAAGGTTATGAGAAGCCAACATCAATACAATGTCAAGCGCTACCAGTTGTGCTTTCTGGCCGAGATATAATTGGTATAGCAAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTCCATATCATGGATCAGCCTGAACTTCAGAAGGAAGAAGGTCCTATAGGAGTAATTTGCGCCCCCACTAGAGAACTGGCACATCAGATATATTTGGAGTCCAAGAAATTTGCAAAATCGTATGGGATACGTGTGTCTGCTGTCTGTGGTGGAATGTCAAAACTTGATCAGTTCAAAGAACTGAAGGCAGGCTGTGAGATAGTTGTTGCTACTCCTGGCAGATTGATAGACATGCTGAAAATGAAGGCACTTACAATGATGAGAGCAACTTACCTGGTGCTCGATGAGGCTGATCGTATGTTTGACCTTGGATTTGAGCCACAGGTGAGGTCCATTGTTGGCCAGATCAGGCCTGACCGTCAAACTTTACTCTTTTCTGCAACAATGCCCCGTAAAGTTGAGAAGTTGGCCAGAGAAATTCTTACTGATCCTGTTAGAGTAACAGTTGGGGAGGTTGGAATGGCAAATGAAGATATTACTCAAGTTGTTCATGTAATTCCATCTGATTCAGAGAAATTGCCATGGCTTCTTGAGAAGCTGCCTGGAATGATTGATGAAGGTGATGTCTTAGTATTTGCTTCCAAAAAGGCTACTGTGGATGAAATTGACTCACAACTGGCTCAAAGAAACTTTAAAGTAGCAGCTCTGCATGGTGATAAAGATCAAGCTTCCCGTATGGATATCTTACAGAAGTTTAAATCGGGTGCCTACCATGTGCTTATTGCTACTGATGTCGCTGCTCGTGGTCTTGACATCAAATCAATTAAGTCAGTGGTAAACTTTGATATTGCAAAAGATATGGATATGCATGTACATCGCATTGGTAGAACAGGTCGTGCTGGTGACAAAGATGGGGTTGCATACACTCTTATAACTCAGAAAGAAGCACGGTTTGCTGGAGAACTGGTTAATAGCTTGATAGCAGCTGGTCAAAATGTGTCCATGGAGTTGATGGATCTTGCTATGAAGGATGGGAGATTCAGGTCCAAACGTGATGCAAGAAAAGGAGGTGGGAGAAAAGGTAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTGTTGGTGGTGGTGGTGGTGGTGGTCGAGGTGTGCGTGGGGTGGATTATGGCTTGGGCATTGGTTATACTCCAGAGTCCAGTTCACCTGCAGTTCCTAGTCGATCCGCCACCGTAAACTCTCTGCGTACAGGAATGATGGCACAGTTTAGGAGTAACTTCGTTGCTGCTTCATCAAACTCTCAGAGTCAAGGCTTCAGTAACAGTACAAGCATGACTGCTAGTAAGAGACCAACCCTCTCTGGCTTCGTATCTGGCGGATCAATTGGCGGGGATATAAACACTAATCGGACTCCTGCTTCATCCAGTCCTGCTACATCGGCGGTAAATGCCACTAGTCAGAACTCTGGTCAGAAGAACACTGACAGCTCCACCTCTAGACCCAGAGAAAGGAGGAGGCCTTCAGGTTGGGATAGATAG | 2076 | 0.4591 | MRAAPPPQPKEKAEDRYRDDDEDDPMESFLRAKKDVGLTLASEALQAGYNSDEEVYAAAKAVDAGMLEYDSDDNPIIVDKKKIEPIPALDHSSIEYEPFNKDFYEEKPSISGMMEQDVAEYRKSLAIRVSGFDVPKPIKTFEDCGFSPQIMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKSYGIRVSAVCGGMSKLDQFKELKAGCEIVVATPGRLIDMLKMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIDSQLAQRNFKVAALHGDKDQASRMDILQKFKSGAYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGRKGRGRGGGGGGGGGGGVGGGGGGGRGVRGVDYGLGIGYTPESSSPAVPSRSATVNSLRTGMMAQFRSNFVAASSNSQSQGFSNSTSMTASKRPTLSGFVSGGSIGGDINTNRTPASSSPATSAVNATSQNSGQKNTDSSTSRPRERRRPSGWDR | 691 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa03g0256 | 691 | Pfam | DEAD/DEAH box helicase | 163 | 334 | IPR011545 | GO:0003676|GO:0005524 | |
Bisa03g0256 | 691 | MobiDBLite | consensus disorder prediction | 524 | 560 | - | - | |
Bisa03g0256 | 691 | Gene3D | - | 101 | 346 | IPR027417 | - | |
Bisa03g0256 | 691 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 139 | 167 | IPR014014 | GO:0003724 | |
Bisa03g0256 | 691 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 107 | 519 | - | - | |
Bisa03g0256 | 691 | MobiDBLite | consensus disorder prediction | 611 | 691 | - | - | |
Bisa03g0256 | 691 | CDD | SF2_C_DEAD | 357 | 489 | - | - | |
Bisa03g0256 | 691 | SMART | helicmild6 | 398 | 479 | IPR001650 | - | |
Bisa03g0256 | 691 | MobiDBLite | consensus disorder prediction | 676 | 691 | - | - | |
Bisa03g0256 | 691 | FunFam | probable ATP-dependent RNA helicase DDX17 | 101 | 348 | - | - | |
Bisa03g0256 | 691 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 122 | 348 | IPR027417 | - | |
Bisa03g0256 | 691 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 291 | 299 | IPR000629 | - | |
Bisa03g0256 | 691 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 370 | 519 | IPR001650 | - | |
Bisa03g0256 | 691 | MobiDBLite | consensus disorder prediction | 611 | 675 | - | - | |
Bisa03g0256 | 691 | Pfam | Helicase conserved C-terminal domain | 382 | 479 | IPR001650 | - | |
Bisa03g0256 | 691 | CDD | DEADc_DDX42 | 150 | 346 | - | - | |
Bisa03g0256 | 691 | Gene3D | - | 347 | 523 | IPR027417 | - | |
Bisa03g0256 | 691 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 170 | 345 | IPR014001 | - | |
Bisa03g0256 | 691 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 286 | 517 | IPR027417 | - | |
Bisa03g0256 | 691 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Bisa03g0256 | 691 | SMART | ultradead3 | 158 | 360 | IPR014001 | - | |
Bisa03g0256 | 691 | MobiDBLite | consensus disorder prediction | 7 | 25 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa03g0256 | Bisa-ChrBisa03 | 3512623 | 3517290 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa03g0256 | 136 | 518 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.347 | 8.50e-64 | 216 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa03g0256 | 03 | 3512623 | 3517290 | Bisa03g0256 | 03 | 3512623 | 3517290 | ECH |