Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0254 ATGCTTTATTTTGTAGCTGGTAATGGTGAAGCCATAAGTTGCACTAGTCCCATCAAAACCATAACAGTTAGCCAATCGGGCAAAGCTCAATTCAAAACCATTCAAAGTGCAATTGCCAGTATCTCCACAGAGACACCCAACACTCAATGGATTCTTATCAAAATAGCCCCTGGCAGTTACAGCGAGCAGGTTACAATTGATAAAATGCAAAGTTGCCTTTTTTTAGATGGTGCGGGGGCCCAATCCACGATCATCCAGGGTGGTCAGCCATCGGTACATTTGAGTGCTACTTTCACTTCAAAAGCAGAAAACATTGTGGCAAAGGGCATTACGTTCAAGGATTGGTTTGACCTCGCTGCGTCAGATCCTGACGCAGTGCCAAATCAGCAAGCTGTAGCTGCGAGAGTGGAGGGCGATAAGTGTTCTTTTTTCGAATGTGCATTTGTGGGAATGCAAGACACCCTCTTTGATCACAGGAGAAATGACCCTCCGGGGTCGGGTGGATATATCACTGCAAACCAAAGGAGCTCAAATGAAGATCCCAGTGGATTCGTGTTCAAAGATTGTAACATAACTGGGAAGGGAAAAGGAGTGGCTTACCTTGGAAGAAGTTATGGAAATCACTCTAGAGTCATCATAGCCAAATCTTATCTAAGCGATGTTGTTGCACCAGAAGGCTGGCTTGCTTGGAACGGTGTTGGCCATGAAGGAAACATTATGTATGTGGAGGAGGGATGCCGAGGACCAGGGTCAGACAAATCAAAACGTGTGCCTTGGATGAAGCATTTAAGTGGAAGTGAGCTTCAACAATATGTGAATCTAAGCTGGATTGATCAAGATGGATGGATTCGCAAACATTCATTACTGCCTTCCAAATTGGACCATTAA 888 0.4471 MLYFVAGNGEAISCTSPIKTITVSQSGKAQFKTIQSAIASISTETPNTQWILIKIAPGSYSEQVTIDKMQSCLFLDGAGAQSTIIQGGQPSVHLSATFTSKAENIVAKGITFKDWFDLAASDPDAVPNQQAVAARVEGDKCSFFECAFVGMQDTLFDHRRNDPPGSGGYITANQRSSNEDPSGFVFKDCNITGKGKGVAYLGRSYGNHSRVIIAKSYLSDVVAPEGWLAWNGVGHEGNIMYVEEGCRGPGSDKSKRVPWMKHLSGSELQQYVNLSWIDQDGWIRKHSLLPSKLDH 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0254 295 Pfam Pectinesterase 21 159 IPR000070 GO:0030599|GO:0042545
Bisa03g0254 295 Pfam Pectinesterase 167 277 IPR000070 GO:0030599|GO:0042545
Bisa03g0254 295 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 15 159 - -
Bisa03g0254 295 SUPERFAMILY Pectin lyase-like 19 284 IPR011050 -
Bisa03g0254 295 Gene3D - 8 161 IPR012334 -
Bisa03g0254 295 Gene3D - 162 292 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa03g0254 Bisa-ChrBisa03 3492650 3494688 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0254 19 236 Carbohydrate Esterase AT2G19150 38.583 2.60e-42 145