Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0253 ATGAACTCCACCACTATGGAGATGGATGGCCATATGTCACCAACAAGTCCTACTTTTGATTCAAGAGCAGATTACGTTGTGGCAAAAGGCATCACGTTCAGGAATACGCACAACAATCCAGGAGGCTTAGGGCATCAAATCCTACCAGCAGAAGCAGCGAGAATAATGGGCGACAAATGTGCTTTCTATGAATGTGCGTTTCTGGGAGTGCAAGACACTCTGGATGATCATAGTGGTCGCCATTATTTCCACAAGTGCTCCATTCAAGGTGGAATCGATTTCTTATTTGGGGACGGCCAATCTATCTATGAGACGCCCCTCCAGGACAGGGTGGGGGTTATCACTGCCCAGAAAAGGGATTCAGATAAAGGATTGACTGGACTTGGGAGAGGTTACAGAGGTCACTCTAGAGTCATTATAGCCAATTCATATTTAGGCGACGTAGTTGCGCCGACAGGCTGGGCTGCTTGGAATGGTGCTGGTCATGAAGAAAATCTGATATATGCGGAAGAGGGATGCTATGGGCCAGGGGCAGACAAGTCAAAGCGTGTACCTTGGATGAAGCACTTAAATGGAAGCGAGCTTGACCAATATATGGTGCTGGTGCCCAATCCACCGTTATCGAGTGGACTCAGCCAACGGGTATATATGAGTGACACTTTCAGTTCAAAAGCAGGTAACATTGTGGCAAAGGACATTATGTTCAAGAATTATTTTGACCTCGCTGCGTCAGATCTTGACGCAGTGCCAAATCAGCCAGCTGTAGCTTTGAGAGTGGAGGGCGATAAGTGTTCTTTTTTCAGATGTGCATTTGTGGGAATGCAAGACACCCTCTTGGATCACAGTAATCGCCATTATTTCTATAATTGCTACATTCAAGGTGGAATAGATTTCATATTTGGGGAGGGCCAATCTATCTACGAGAAATGTACTATCTTCTTTTCAAGATCAAGAGGGATGGGTGGATATATCACTGCAAACCAAAGGAGCTCAAATGAAGATCCAAGTGGATTCGTGTTCAAAAATTGTAACATAACTGGGAAGGGAAAAGGGGTGGCTTACCTTGGGAGAAGTTATGGAAATTACTCTGGAGTCATCATAGCCAATTCTTATCTAAGCGACGTCGTTGCACCAGCAGGCTCGCTTGCTTGGAATGGTGTTGGCCACGAAGGAAACATTACGTATGTGGAGGAGGGATGCCGAGGACCAGGATCAGACAAATCAAAACGTGTGCCTTGGATGAAGCATTTAAGTGGAAGTGAGCTTCAACAATATGTGAATCTAAGCTGGATTGATCAAGATGGATGGATTCGCAAACATTCATTACTGTCTTCCAAATTGGATCATTTCCTTAATTGGAATCCACTATAA 1371 0.4486 MNSTTMEMDGHMSPTSPTFDSRADYVVAKGITFRNTHNNPGGLGHQILPAEAARIMGDKCAFYECAFLGVQDTLDDHSGRHYFHKCSIQGGIDFLFGDGQSIYETPLQDRVGVITAQKRDSDKGLTGLGRGYRGHSRVIIANSYLGDVVAPTGWAAWNGAGHEENLIYAEEGCYGPGADKSKRVPWMKHLNGSELDQYMVLVPNPPLSSGLSQRVYMSDTFSSKAGNIVAKDIMFKNYFDLAASDLDAVPNQPAVALRVEGDKCSFFRCAFVGMQDTLLDHSNRHYFYNCYIQGGIDFIFGEGQSIYEKCTIFFSRSRGMGGYITANQRSSNEDPSGFVFKNCNITGKGKGVAYLGRSYGNYSGVIIANSYLSDVVAPAGSLAWNGVGHEGNITYVEEGCRGPGSDKSKRVPWMKHLSGSELQQYVNLSWIDQDGWIRKHSLLSSKLDHFLNWNPL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0253 456 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 216 438 - -
Bisa03g0253 456 Pfam Pectinesterase 10 128 IPR000070 GO:0030599|GO:0042545
Bisa03g0253 456 Pfam Pectinesterase 212 431 IPR000070 GO:0030599|GO:0042545
Bisa03g0253 456 Gene3D - 204 447 IPR012334 -
Bisa03g0253 456 SUPERFAMILY Pectin lyase-like 214 438 IPR011050 -
Bisa03g0253 456 SUPERFAMILY Pectin lyase-like 12 199 IPR011050 -
Bisa03g0253 456 Gene3D - 1 202 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0253 Bisa-ChrBisa03 3447926 3453276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0253 228 442 Carbohydrate Esterase AT1G05310 40.991 4.24e-47 165