Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0250 ATGAATCTGCCAGAATTCCCTTCCTTCATCTTTTCATTGCTATTCCTTTATCTTGGAGTTTGTTTTTGGTCATATGTAATACACGGGCCATCGTGGGCCAGGACTGGCATCAACCCGGCTCAATCACAAGGCAGAGTCAAAGAATGTGGAGGTCCTTTCAGAACCATAACAGTGAATCAATCGGGCCAAGCACAATTCAGAACTATTCAAAGTGCAATTGACACTATTTCTACAAAGACATGGAACACTCAATGGATTCGCATCCAGATTTCCCCCGGCATTTACAGAGAGCAGGTCGGAATTACTAAAAGACAAAGTTGCATTTATCTAGAAGGAGGGGGTAGCAATTCCACCATTATCGAGTGGGATGGCCATAAGTCACGAACGAGTCCCACTTTCATTTCAAGAGCAGATAACACTGTGGCAAAGGGCATTACTTTCAAGAATACGTATAACTACCGAGGAGGTGCGAACCCAATAGCCCCAGCGGAAGCAGCAACTGTAAGGGGCAACAAATGTTCTTTTCATGAATGTGCGTTTCTGGGAGTGCAAGACACCCTCTTTGATCACAGTGGTCGTCATTACTTCTATAGGTGCTTTATTCAGGGTGGAATCGATTTCATATTTGGGGGTGGCCGATCTATCTATGAGGAATGTACTATCAACTTTTCAATGGGGAAGAGCGCCCCGGGACGAGGTGGAGTTATCACTGCAAATTCAAGGGAGTCAAATGAAGATTTGAGTGGGTTTGTGTTCAAAAATTGTATCATAACTGGGAAGGGAAAAGGACTGGCTTATCTTGGAAGAGGTTATAGAAATCACTCTACAGTCATTATAGCTAATTCTTATCTAGGCGACGTCATTGCACCAATTGGTTGGGATGCCTGGACCGGTGCTAACCATGTAGAAAACCTGATATATGCAGAAGAAGGGTGCTGGGGACCAGGGGCAGACAAGTCAAAGCGTCCACCTTGGATGAAGCAGTTAAGTGGAAGCGAGCTTGACCAATATGTGAACATGTCCTTCATCGATCAAGAAGGATGGATTCACAAACATCCAATTTATTCTTCCTAA 1074 0.4423 MNLPEFPSFIFSLLFLYLGVCFWSYVIHGPSWARTGINPAQSQGRVKECGGPFRTITVNQSGQAQFRTIQSAIDTISTKTWNTQWIRIQISPGIYREQVGITKRQSCIYLEGGGSNSTIIEWDGHKSRTSPTFISRADNTVAKGITFKNTYNYRGGANPIAPAEAATVRGNKCSFHECAFLGVQDTLFDHSGRHYFYRCFIQGGIDFIFGGGRSIYEECTINFSMGKSAPGRGGVITANSRESNEDLSGFVFKNCIITGKGKGLAYLGRGYRNHSTVIIANSYLGDVIAPIGWDAWTGANHVENLIYAEEGCWGPGADKSKRPPWMKQLSGSELDQYVNMSFIDQEGWIHKHPIYSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0250 357 Pfam Pectinesterase 56 344 IPR000070 GO:0030599|GO:0042545
Bisa03g0250 357 FunFam Pectinesterase 52 353 - -
Bisa03g0250 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 350 - -
Bisa03g0250 357 Gene3D - 53 356 IPR012334 -
Bisa03g0250 357 SUPERFAMILY Pectin lyase-like 54 352 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0250 Bisa-ChrBisa03 3366276 3371114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0250 54 296 Carbohydrate Esterase AT2G19150 48.163 5.96e-70 219