Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0247 ATGGAGAAGAAGATTGGGGTGAAGACGGAGGAGGCACTTGGGTCGTCTTCTTTATTGTCGGGTTACAACGGGTATCCGTTTTCGAGTGTATTTGATGTGTGTGAAGCGGAAAAGAGCTCTTTAGGGTTTATGGAGTTACTGGGTGTGCAGGACTACAGTCCTGTGCTTGATTTGCCTTTGACACAGCAAGTGTCCACAATTGCTCCTTCCGACACTGCCAAGGAGTGTTCCGAGGTGTTGAATCAACAACCTGCGACTCCCAACTCTTCGTCCATCTCGTCGGCGTCCAGCGAGGCTGTCACTCTCAACGATGAACACAATAAAACTGTAGACCAACCAGATGAAGAACACCACAACACCAAGAAACAGTTGAAACCCAAGAAGACAAATCAGAAGAGACAGAGAGAGCCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGAGTGGAGCGATCATTTAGCGATCCAAGCATTGTGGTGACAACCTATGAAGGCCAACACACCCATTCAAGCCCAGTTATGCCTCGCTCAAACCTAGCCGGCGTCGGAGCCGGAGCTCCACCGCCGCCAGCCGCCTCCTTTGGTTCACTAATGGCAAGGAACCTCCTATCGCAGTATCATAACCCTCAACAACTACAACAAGTACTCCTTCATAATAACAATGTGTTATCGTCTATGGGCTTTCCTAGCATTAGCAGTATTGACTCTTCAACTTCAAAGAACGCTGCGTTTACATTCGGTCAAGAGAGAAGGCTTTGTAATTCAGGGGCTGCTGTTGCTGCTTCTTTTCTAGGGGACCATGGCCTTCTTCAGGATGTTATTCCTTCCCATATGTTGAAAGATGAGTAG 963 0.4787 MEKKIGVKTEEALGSSSLLSGYNGYPFSSVFDVCEAEKSSLGFMELLGVQDYSPVLDLPLTQQVSTIAPSDTAKECSEVLNQQPATPNSSSISSASSEAVTLNDEHNKTVDQPDEEHHNTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFSDPSIVVTTYEGQHTHSSPVMPRSNLAGVGAGAPPPPAASFGSLMARNLLSQYHNPQQLQQVLLHNNNVLSSMGFPSISSIDSSTSKNAAFTFGQERRLCNSGAAVAASFLGDHGLLQDVIPSHMLKDE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0247 320 PIRSF WRKY_txn_fact_IIc 1 320 IPR017396 GO:0003700
Bisa03g0247 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 245 IPR044810 GO:0003700
Bisa03g0247 320 MobiDBLite consensus disorder prediction 75 139 - -
Bisa03g0247 320 MobiDBLite consensus disorder prediction 104 122 - -
Bisa03g0247 320 SUPERFAMILY WRKY DNA-binding domain 142 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g0247 320 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0247 320 SMART WRKY_cls 150 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0247 320 Gene3D WRKY domain 135 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g0247 320 FunFam WRKY transcription factor 57 136 210 - -
Bisa03g0247 320 ProSiteProfiles WRKY domain profile. 145 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g0247 320 MobiDBLite consensus disorder prediction 75 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0247 Bisa-ChrBisa03 3326069 3327520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0247 32 320 WRKY Transcription Factor Family AT2G47260 46.667 1.34e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa03g0247 WRKY 1.5e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0247 03 3326069 3327520 Bisa07g1622 07 41441890 41443208 CCT
Bisa03g0247 03 3326069 3327520 Bisa03g0247 03 3326069 3327520 ECH