Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0244 ATGGACCGTCCTTGCGAATTCAACAAACAAATAGACCATAAGACCGACCCCATCAAAATAGGCACGCCATTCTCAAACAGCACGCTTTCTGCCCGATCAAACCGTAAGACCTGGCAATCCTCTCTGAGCTGTACTAGCCGTAATTACAAGTTTAGAAAGATCTGTAAAAATCCAGAAGTGGTGATGGCAAATCGACTAAAGGAAGATGAGAAGAATGAACGAATAATTCGGGGTCTTCTGAAACTCCAAGCGAATCGCAGATGTATTAATTGCAGCAGCCTGGGACCACAATATGTCTGCACAAATTTCTGGACATTTGTTTGCACAAACTGTAGTGGTATACACCGGGAATTCACACACAGAGTTAAATCAATTTCAATGGCTAAATTTACTTCACAAGAAGTTAGTGCACTTCAGGACGGAGGGAATCAGCGTGCAAAGGAAATTTATTTTAAAGAATGGGATCCACTACGTCATTCTCTGCCTGATAGCAGTAATGTTGACAGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAGATTTAGTGGTGAGAGGACCTCTGACAAACCACCGAGAGTAAAGGGTGACAAGGATGATTTCTTTGAAAACAAGAGATTTGAGATGAACCGGGGAGGATCTAGAAGCCCACCATATGAGGAAACATATGAACGTCGTTACAGTTCCAGTTCTGGTGGAAGAAGTCCTGGATACGATCATGAAAGTAGGCAATATGGTGATTATAGGAAAAGCCCTAGTCATCCTCCAGTAATCAATGATTGGCGTCGTGAAGATAGATTTGGAGATGGAAGGAGATTTGAAGATCGTAGAATATCTGATGGAGATTATAAGCTGGAAGGGCAATCACCTGAGCGAGGCAAAGATCTGGATTCTTCAAGTTCACCTGTTGTACGGCCTGTCAGAGATATTTTGGGAGAAAATGTTGTTCCTCTTCGAATAAGTGAACCCCCTAAAGCAAACAGTGGAAAGGCTGCTGATGGTTTGGCACCCACACAGAGAACTGCATCTTCCAGTAGCTTGGCATCCAGCAACGGAAACACAGCAGAAGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGAGCCCAAACCTCCTGTTGCTCCAGCAATTCCACAAGCCCAACAATCTACTGTGGCTCAATCTGTAGCGCAACCAGCAAAATCTAATGATGACAATTGGGCCTCTTTTGATGTTGCTCCTGGGGCAAAAGCAATCCAAGGTCCTTCAAATATCAATCCACTTGAGTCTGTGCTGTCAGAATTGTCAATGCCATCACCTGCACCTGCTCCTGTTTCTGGAGTCCAAGGGCCTCTGTCAGCATTAGCACCGGCTGCAGCTGCTGGTGGAGCTGGAAATGTTGGCAACTTCTCAACACTCCCACCAACTGGTGCTTCTGTAACAGCACCTGGATTGACGACAGTATCACCTCTCAATGATGCAGGCCGGTGGACCAGTATGCAGCATCAGCAACCTGTGTTGCTTACCCCTGTTAGTCAGCCTACTACTCAGCAATTTACACCATCAGTAGGATTTTTAAGCAATCAGCAGTGGAGTGTATCTCCAGTGCCCACAATACAAGGGCATCCAGGTACACCAATGCCAAATGCATCCCATCTTGTCTCAAAACCTACCAATGAGGTTAACTCTAGTGTTGTTTCACAACCTTCAACAGTAGAGGTACAACCAAGTGGAAGAAAAGAACTTCCTGCGGATCTTTTTACCATAAAGTATCCAGCCTACCCTTCTCCTGTTCGGGCGTGGCAAATGGGTCCTCCCCATGGCATGGGCATCTATATGCAATACAATACTGCTGCGCCCATGCCAAGTTTTCCACAGCCATCTAAGTCAACAAATCCATTTGATGTCAGCAGTGAACCACCTCCACTTCAAGCCCCAACGTTCCCTTCCATGTCATCCTTGCAAGGTGCTCTGCCTAGTGTGCCGCCTTCTTTAGGTTTAATGCATCCTTCAAGCCTGGCTAATCCATCACTTGCCTGGAACTCACCCCAGTCATCGTTATATGGGTCAGCAATGCCCCCACAATCACAAGTTCAAGCATCAGCAATGGCACCAAGGGCATTCATGGGGCAACAAATGCCAACTATTATGTCAATGCCAAGGCATCAAGAAATTGGGAATACTAGTACCGAGGGAGCTGCTTTGGGCTTTTCAACCCCTGCTACCGCAAATTCCTTCTCTGCTGGAGGGAACCCATTTGGATGA 2256 0.4583 MDRPCEFNKQIDHKTDPIKIGTPFSNSTLSARSNRKTWQSSLSCTSRNYKFRKICKNPEVVMANRLKEDEKNERIIRGLLKLQANRRCINCSSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTSQEVSALQDGGNQRAKEIYFKEWDPLRHSLPDSSNVDRLRDFIKHVYVDRRFSGERTSDKPPRVKGDKDDFFENKRFEMNRGGSRSPPYEETYERRYSSSSGGRSPGYDHESRQYGDYRKSPSHPPVINDWRREDRFGDGRRFEDRRISDGDYKLEGQSPERGKDLDSSSSPVVRPVRDILGENVVPLRISEPPKANSGKAADGLAPTQRTASSSSLASSNGNTAEVKLETTKSLIDFDAEPKPPVAPAIPQAQQSTVAQSVAQPAKSNDDNWASFDVAPGAKAIQGPSNINPLESVLSELSMPSPAPAPVSGVQGPLSALAPAAAAGGAGNVGNFSTLPPTGASVTAPGLTTVSPLNDAGRWTSMQHQQPVLLTPVSQPTTQQFTPSVGFLSNQQWSVSPVPTIQGHPGTPMPNASHLVSKPTNEVNSSVVSQPSTVEVQPSGRKELPADLFTIKYPAYPSPVRAWQMGPPHGMGIYMQYNTAAPMPSFPQPSKSTNPFDVSSEPPPLQAPTFPSMSSLQGALPSVPPSLGLMHPSSLANPSLAWNSPQSSLYGSAMPPQSQVQASAMAPRAFMGQQMPTIMSMPRHQEIGNTSTEGAALGFSTPATANSFSAGGNPFG 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0244 751 MobiDBLite consensus disorder prediction 731 751 - -
Bisa03g0244 751 MobiDBLite consensus disorder prediction 185 356 - -
Bisa03g0244 751 MobiDBLite consensus disorder prediction 338 356 - -
Bisa03g0244 751 FunFam Arf-GAP domain and FG repeat-containing protein 1 62 196 - -
Bisa03g0244 751 MobiDBLite consensus disorder prediction 619 635 - -
Bisa03g0244 751 MobiDBLite consensus disorder prediction 619 645 - -
Bisa03g0244 751 SMART arf_gap_3 76 191 IPR001164 GO:0005096
Bisa03g0244 751 MobiDBLite consensus disorder prediction 185 211 - -
Bisa03g0244 751 CDD ArfGap_AGFG 73 183 - -
Bisa03g0244 751 PANTHER ARFGAP/RECO-RELATED 62 751 IPR044820 GO:0005096
Bisa03g0244 751 Pfam Putative GTPase activating protein for Arf 74 184 IPR001164 GO:0005096
Bisa03g0244 751 PRINTS HIV Rev interacting protein signature 85 104 IPR001164 GO:0005096
Bisa03g0244 751 PRINTS HIV Rev interacting protein signature 104 121 IPR001164 GO:0005096
Bisa03g0244 751 PRINTS HIV Rev interacting protein signature 122 143 IPR001164 GO:0005096
Bisa03g0244 751 MobiDBLite consensus disorder prediction 224 238 - -
Bisa03g0244 751 MobiDBLite consensus disorder prediction 257 294 - -
Bisa03g0244 751 Gene3D Arf GTPase activating protein 62 193 IPR038508 -
Bisa03g0244 751 ProSiteProfiles ARF GTPase-activating proteins domain profile. 73 191 IPR001164 GO:0005096
Bisa03g0244 751 SUPERFAMILY ArfGap/RecO-like zinc finger 72 184 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0244 Bisa-ChrBisa03 3306919 3314096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0244 73 183 C2H2 Transcription Factor Family AT4G21160 33.333 7.12e-11 62.8