Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0218 ATGAAAGCAGCGAACCCACTGGGAGCGAAAACTGCCAGAGCCTGCGATAGCTGCCTACGCAGACGAGCGAGATGGTTCTGTGGAGCCGACGACGCTTTCCTCTGCCATGCCTGCGACAATCTGGTTCACTCGGCCAATCAATTAGCAAGCAGACACGAGAGGGTTCGCCTCCAAACGGCTTCGTGTAAGAAGCCCGTTGTACTTGGTAATAGTACTCCGCGACAAGCGTGGCACAGTGGATTCAGAAGGAAGGCAAGAACCCCGCGTCATGGTAATAAGCACTTATTGCCTCAGCAGCAACGGCCATGTAAACATGAAGATGGAGAAGAAGAAGGGATTTTCAATTGTAGTGTTCTTCCGGTGGTGCCGGAGCTGGGAAGCGAAGAGGCTATGGTGGAGGAGAGCGAGGAGCAGCTGCTCTGTCGGGTGCCGGTGTTGGAGTCCTTTGAAGCTGAGCTTTGCAATATTTACGGTGAAATTGGGGACAACAGATTCGTGGGGATGCTCAAGAAAGATGATGAAGAGGCATGTGATTTGGACGATTTCCCCGATCTTCTTGGGTCGGATATGGATATTGCAGAGTTCGCTGCTGATGTTGAGAGTCTTCTGCAAACAACAGAGGAGGGTGAATCAGGAGCGCAAATGTTTGGTTGTAAACGTGAAGATGAAGCAATAATGGGAGACGAAATAAAGATTAAGGATGAACAAGTAGTTGAAGGTAATGCAATTGTGGATATGATCACAAGCGAGGCCTTCATGAATTGGAATAACACTGAGAGTAATACGATTACAAATACTACTCAGACTCAATCATCATCACAAGAAGAGGAAGAGGTGGTGGATAAGGCAGAGACGAAAAGGAAGATATTTTTGAGGCTAAATTACGAGGATGTAATTAGTGCTTGGGCTAGCCAAGGTTGTCCATGGACAACAGGACACCCTCCTCAGCTCAATTCGCATGACTGCTTGGAATGGGGGGTAGCAGAAGATGTGGAACAGTGGAGTTATGGGAGGTTGATGAAGGGACAGGTGGGAGATGGGGGAAGAGAAGCGAGAGTGACGAGGTACAGAGAGAAGAGAAGGACACGTTTGTTTGCGAAGAAAATAAGGTACGAGGTTAGGAAATTGAACGCAGAGAAGAGACCCAGAATGAAGGGACGGTTTGTGAAGAGGGCGTCCTTCCTTCCAAACCCAGAGGCTTTGCCTCCTCCTGCAGCTTCCCGTTGA 1227 0.489 MKAANPLGAKTARACDSCLRRRARWFCGADDAFLCHACDNLVHSANQLASRHERVRLQTASCKKPVVLGNSTPRQAWHSGFRRKARTPRHGNKHLLPQQQRPCKHEDGEEEGIFNCSVLPVVPELGSEEAMVEESEEQLLCRVPVLESFEAELCNIYGEIGDNRFVGMLKKDDEEACDLDDFPDLLGSDMDIAEFAADVESLLQTTEEGESGAQMFGCKREDEAIMGDEIKIKDEQVVEGNAIVDMITSEAFMNWNNTESNTITNTTQTQSSSQEEEEVVDKAETKRKIFLRLNYEDVISAWASQGCPWTTGHPPQLNSHDCLEWGVAEDVEQWSYGRLMKGQVGDGGREARVTRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRASFLPNPEALPPPAASR 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0218 408 Pfam B-box zinc finger 12 55 IPR000315 GO:0008270
Bisa03g0218 408 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Bisa03g0218 408 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 4 392 - -
Bisa03g0218 408 Pfam CCT motif 349 391 IPR010402 GO:0005515
Bisa03g0218 408 CDD Bbox1_BBX-like 14 57 - -
Bisa03g0218 408 MobiDBLite consensus disorder prediction 69 97 - -
Bisa03g0218 408 ProSiteProfiles CCT domain profile. 349 391 IPR010402 GO:0005515
Bisa03g0218 408 MobiDBLite consensus disorder prediction 261 280 - -
Bisa03g0218 408 SMART bboxneu5 10 57 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0218 Bisa-ChrBisa03 2766838 2768153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0218 4 391 C2C2-CO-like Transcription Factor Family AT1G25440 42.890 3.12e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa03g0218 zf-B_box 3.7e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0218 03 2766838 2768153 Bisa03g0218 03 2766838 2768153 ECH