Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0200 ATGTCTACTTCAAAGAGCGACAGCAGTTGTAGTGAAGATGACAATGAACTCAGAAGAGGACCTTGGACTCTTGAAGAGGATACTCTGCTCACCCAATACATCTCTAGCCATGGGGAAGGACGATGGAATTTGCTGGCAAAAAATTCAGGATTAAAGAGGACGGGAAAGAGCTGCAGATTGAGGTGGCTTAATTATCTGAAGCCAGATGTAAAGCGAGGAAATTTAACCCCACAAGAGCAGTTTCTGATTCTTGAACTCCACTCTAAGTGGGGCAACAGGTGGTCAAGGATTGCACAACATCTTCCGGGGAGAACTGATAATGAGATCAAGAACTACTGGAGAACTAGGATTCAGAAACAAGCAAGACACTTGAATATTGACACAAGCAGCACAGAGTTTCAAGAAATCATCAGGCGCTGTTGGATGCCAAGATTGCTTCAGAAAGCAAGAGAAGCAGCTTCTCCTCCCGCCATGTATGTGCAAAACCAAACGATTCCTTTGCCTCTTGACAGTGTTTCTCAGTGTTCACAAATGGGGACAGTACAGACTCCTCGGCAGGAATCTTGTATGAACCAAACGCTTCAATATAGTTCATGTCAATATAGTCCATGCATGTCCTCCTCGTTTTCAGAATCATCAAACATCCCGCAAGTGTCTCAGATTTTGGGATACAGTGCTACTCAGTTTCATGCCTTAGACAACAGCGACTTTAGCTCCTTTGCGTGTGATGGCTGCTATGTAAACGACGACAAGAAAGCATTCAATCTGGCAACCACAGTGGCTGCTGGGGACATGGAAAGCAATTGGGCGATCAATGATGTTGCATGTAGCATGTGGGACATGGACGAATTGTGGCAGTTTCAAAACTTACAAGAATAA 879 0.4448 MSTSKSDSSCSEDDNELRRGPWTLEEDTLLTQYISSHGEGRWNLLAKNSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQFLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTRIQKQARHLNIDTSSTEFQEIIRRCWMPRLLQKAREAASPPAMYVQNQTIPLPLDSVSQCSQMGTVQTPRQESCMNQTLQYSSCQYSPCMSSSFSESSNIPQVSQILGYSATQFHALDNSDFSSFACDGCYVNDDKKAFNLATTVAAGDMESNWAINDVACSMWDMDELWQFQNLQE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0200 292 FunFam Myb transcription factor 19 71 - -
Bisa03g0200 292 Gene3D - 19 71 - -
Bisa03g0200 292 SMART sant 71 119 IPR001005 -
Bisa03g0200 292 SMART sant 18 68 IPR001005 -
Bisa03g0200 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Bisa03g0200 292 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Bisa03g0200 292 FunFam MYB transcription factor 75 117 - -
Bisa03g0200 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Bisa03g0200 292 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Bisa03g0200 292 Gene3D - 75 120 - -
Bisa03g0200 292 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Bisa03g0200 292 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Bisa03g0200 292 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 210 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa03g0200 292 CDD SANT 76 115 IPR001005 -
Bisa03g0200 292 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Bisa03g0200 292 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0200 Bisa-ChrBisa03 2576795 2577849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0200 14 288 MYB Transcription Factor Family AT1G68320 47.931 2.79e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g0200 Myb_DNA-binding 6.8e-15 CL0123