Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0193 ATGGCGACGCCGTTAGCCGGACTACAGCACTTGGACGGAGGTGTAAGAGTGGCGGTGCTTTCCAATTCTGTGAATAAGGTCGATTCCTCCTCTGCCACGTCCAATGGTAGCTTGAAGTGCTCCGGATTGGAGTCACCAATTTTGATTTTCCTGTTCTTCCACAAAGCAATTCGGAATGAGCTTGATGCCCTTCACCGACTGGCTATGGCATTTGCTACGGGAAATCGCTTTGATATTCAGCCGTTGTTCGAACGCTATTATTTCGTGAGATCAATTTACAGGCACCACTCCAATGCCGAAGATGAGGTGATCTTTCCGGCTCTTGATATACGTGTGAAAAATGTAGCACAGACATATTCTCTCGAACACAAGGGTGAAAGCAATCTTTTTGATCATCTATTTGGGCTGTTAAATTCTACTGTCCAGAATGATGAAAGTTTCCCAAGGGAGTTAGCATCCTGCGCAGGTGTGCTACAGACGTCAATTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTGTTTCCGCTGCTTATTGAGAAGTTCTCTCTTGAGGAACAAGCATCTTTAGTTTGGCAGTTTCTGTGCAGTATTCCTGTAAATATGATGGCAGTATTTCTTCCATGGCTTTCAACATCCATATCTCCTGATGAATCTCAGGATTTGCGGAGGTGCTTAAGCAAGGTAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCAATTGGATGGAAGGGAGTAGTGGTGCTACCACAGCTGAAAGTTGTATGGATCATTTTCAGGTTCGAGATTGTCATTGCCCATTAACCCATCAGATTGAGAAAGTAAAATGTGCATGCGAGTCCACAACAACTGGAAAAAGGAAATATTCTGAATCAAGTCTAGATATTTCTGATACAAATGGAGCACATCCTATAGATGAAATACAGCTATGGCATAATGCTATTAAAAAAGAGTTAAGTGAGATAGCAATGGAGACCAGAAAGATACAGCTCTCTGGAGATTTTACTAATCTTTCAGCTTTTAATGAAAGATTGCAATTTATTGCTGAAGTCTTCATATTTCACAGCATTGCCGAGGACAAGGTTATATTTCCAGCAGTCGATGGTGAATTTTCTTTCTATCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGATTTTCGGTGTTTGATTGAAGCTATTCACAATGAAGGAGCAACGTCTAATGCAGAAGCTGAGTTTTATTCCAAGTTATGCTCACATGCTGATCATATAATGGAAACTATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTCGGAAGCTCTTTAGCTTCAAAAGGCAACGTGAACTTCTGTATCAAAGCTTGTGCATGATGCCTCTAAAATTGATTGAACGCGTCCTGTCATGGTTGGTAGGATCATTAACCGAAGATGAAGTGAAGATGTTTTTAAAAAACATGCAATTAGCAGCTCCAGCAACAGATTCTGCTCTAGTCACACTTTTCTGTGGTTGGGCTTGCAAGGCCCGTAATGAGGGTCTGTGTTTGTCTTCAAGTGCATCAGGTTGCTGTCATGCCCAAAGACTCACTGATATTGAAGAAAATATTGTCCAGTCATCCTGTCCTTGTGCTTCTGCATTAGCTGCTAGAAATTGCTCAGTGCTAATTCTAGATGAGAACAAAAGGCCAGTCTGGCGAAACATCTTGGAGTTTTGCAAGAATAAAGATGCCCCTGAAACTTCAGGGACTAAAAGTATTCAGAGACAATGTTGTAGTGCTCGCTCTTGTTGTGTGCCAGGTTTAGGAGTGAGCGGTAATAATCTGGGAATAAGTTCTCTTTCTACTGCCAAGTCTATGCGGTCCTTATCTTTCAGCTCTTCTGCTCCATCTCTAAATTCTAGCCTTTTCATATGGGAAACAGATAACAACTCATGTCATAACCCTGCAGAGATACCAATTGATACTATTTTTAAATTCCACAAAGCTATACGCAAAGACTTGGAGTATTTAGATGTTGAATCTGGGAAGCTTAGTGATGGTGACGAGACAATTCTTCGGCAGTTCACTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCACAGTAATGCTGAAGATGATATAGTATTTCCAGCACTGGAATCCAAAGAGTCACTTCATAATGTGAGTCATTCTTACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCCTGCGTTCTTCGTGAGCTTTCTGTCCTTCATCAAGATTTGAAGATGACCAATTTGTCAAATGAAAGTAACAATGAAACTTCTGATGCCAATTTTAGAGACAATATCAGAAAGTACAATGAGCTAGCAACTAAACTTCAAGGGATGTGCAAATCCGTAAGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAGCGTGAGCTCTGGCCATTATTTGGGAGACATTTCACTGTGGAAGAACAAGACAAGATAGTAGGCCGGATAATTGGAACTACAGGTGCTGAAGTTCTCCAATCAATGTTGCCTTGGGTAACTTCTGCACTTACTCAGGAAGAACAAAACAAAATGATAGACACATGGAAGCAGGCAACTAAGAATACTATGTTCAATGAATGGCTTAATGAATGCTGGAAAGAAAGCCCAGCACCTATATCTCAGACAGAAATGTCAGGGCAAACCACTTCCCAAAGAGAAGAATATCAAGAAAGCCTGGACCTGAATGATCAGATGTTTAAGCCAGGTTGGAATGACATATTCCGGATGAATCAAAATGAGCTTGAATCAGAGATCCGGAAGGTTTATCGGGACTTAACTCTTGATCCAAGGAGAAAGGCATATCTTGTACAGAATCTAATGACTAGTCGCTGGATAGCTGCCCAGCAGAAGTTACCGAAAGCTATAGCTGGGGAGTCTTCTAATAGTGAAGAAATAGAGGGACGTTCAGCATCATTTCGAGACAAGAAGAAACAAGTATTTGGGTGTGAACACTATAAGAGAAACTGCAAACTGCGAGCAGCATGTTGTGGCAAGTTGTTTACATGTAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACATCAGAAATGATGTGTATGCGATGCCTGAATATACAGGCAGTAGGGCCTATATGCATGACGCCCTCATGTAATGGACTTTCAATGGCAAAATATTATTGCAATATATGCAAATTTTTTGATGATGAAAGGAATGTTTATCACTGCCCATTTTGCAATTTATGCCGTGTGGGAAGAGGGCTTGGGATTGATTATTTTCATTGTATGAAATGTAACTGCTGCCTGGGGATAAAATCGACGTCTCACAAGTGCCTGGAGAAAGGCTTAGAAATGAATTGCCCGATTTGCTGTGACTTTTTATTCACATCAAGTGCTACAGTCAGAGCTCTACCATGTGGCCATTATATGCACTCAGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAATCATTAGGAGACATGGCGGTTTACTTTGGTATGCTTGATGCTTTATTGGCTGCTGAGGAGCTTCCGGAAGAGTACAGGGACCGTTATCAGGACATACTCTGCAATGACTGTGATCGAAAGGGCGCCTCGCGCTTCCACTGGCTATATCACAAATGTGAATTTTGTGGGTCATACAATACCAGGGTGATAAAGTGCGAGACGTCAAATTCCCGCTGCTCTTAG 3717 0.4151 MATPLAGLQHLDGGVRVAVLSNSVNKVDSSSATSNGSLKCSGLESPILIFLFFHKAIRNELDALHRLAMAFATGNRFDIQPLFERYYFVRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFGLLNSTVQNDESFPRELASCAGVLQTSISQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAVFLPWLSTSISPDESQDLRRCLSKVVPEEKLLQKVIFNWMEGSSGATTAESCMDHFQVRDCHCPLTHQIEKVKCACESTTTGKRKYSESSLDISDTNGAHPIDEIQLWHNAIKKELSEIAMETRKIQLSGDFTNLSAFNERLQFIAEVFIFHSIAEDKVIFPAVDGEFSFYQEHAEEESQFNDFRCLIEAIHNEGATSNAEAEFYSKLCSHADHIMETIQRHFHNEEVQVLPLARKLFSFKRQRELLYQSLCMMPLKLIERVLSWLVGSLTEDEVKMFLKNMQLAAPATDSALVTLFCGWACKARNEGLCLSSSASGCCHAQRLTDIEENIVQSSCPCASALAARNCSVLILDENKRPVWRNILEFCKNKDAPETSGTKSIQRQCCSARSCCVPGLGVSGNNLGISSLSTAKSMRSLSFSSSAPSLNSSLFIWETDNNSCHNPAEIPIDTIFKFHKAIRKDLEYLDVESGKLSDGDETILRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKESLHNVSHSYMLDHKQEEKLFEDISCVLRELSVLHQDLKMTNLSNESNNETSDANFRDNIRKYNELATKLQGMCKSVRVTLDQHIFREERELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMIDTWKQATKNTMFNEWLNECWKESPAPISQTEMSGQTTSQREEYQESLDLNDQMFKPGWNDIFRMNQNELESEIRKVYRDLTLDPRRKAYLVQNLMTSRWIAAQQKLPKAIAGESSNSEEIEGRSASFRDKKKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQAVGPICMTPSCNGLSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSTSHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQDILCNDCDRKGASRFHWLYHKCEFCGSYNTRVIKCETSNSRCS 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0193 1238 FunFam Zinc finger protein BRUTUS 645 874 - -
Bisa03g0193 1238 Pfam Zinc-ribbon 1169 1226 IPR039512 -
Bisa03g0193 1238 ProSiteProfiles Zinc finger CHY-type profile. 986 1055 IPR008913 GO:0008270
Bisa03g0193 1238 FunFam Zinc finger protein-related isoform 1 1117 1166 - -
Bisa03g0193 1238 CDD RING-H2_Pirh2-like 1121 1164 - -
Bisa03g0193 1238 Gene3D nmb1532 protein domain like 303 453 - -
Bisa03g0193 1238 Gene3D nmb1532 protein domain like 45 195 - -
Bisa03g0193 1238 ProSiteProfiles Zinc finger CTCHY-type profile. 1058 1121 IPR017921 -
Bisa03g0193 1238 CDD Hr-like 306 435 - -
Bisa03g0193 1238 SMART ring_2 1122 1163 IPR001841 -
Bisa03g0193 1238 CDD Hr-like 49 175 - -
Bisa03g0193 1238 SUPERFAMILY RING/U-box 1119 1174 - -
Bisa03g0193 1238 ProSiteProfiles Zinc finger RING-type profile. 1122 1164 IPR001841 -
Bisa03g0193 1238 Pfam Hemerythrin HHE cation binding domain 51 177 IPR012312 -
Bisa03g0193 1238 Pfam Hemerythrin HHE cation binding domain 650 810 IPR012312 -
Bisa03g0193 1238 Pfam Hemerythrin HHE cation binding domain 303 437 IPR012312 -
Bisa03g0193 1238 Gene3D nmb1532 protein domain like 643 883 - -
Bisa03g0193 1238 Pfam Ring finger domain 1121 1163 IPR001841 -
Bisa03g0193 1238 SUPERFAMILY CHY zinc finger-like 987 1049 IPR037274 GO:0008270
Bisa03g0193 1238 CDD Hr-like 652 809 - -
Bisa03g0193 1238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1118 1166 IPR013083 -
Bisa03g0193 1238 Pfam CHY zinc finger 993 1068 IPR008913 GO:0008270
Bisa03g0193 1238 Gene3D - 1193 1235 - -
Bisa03g0193 1238 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 693 1234 - -
Bisa03g0193 1238 SUPERFAMILY Zinc hairpin stack 1059 1115 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0193 Bisa-ChrBisa03 2481828 2492678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0193 1 1238 C2H2 Transcription Factor Family AT3G18290 66.110 0.0 1673