LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g0187	ATGGCCGCCAAACGCTTCTTTGATGATTCTGATCAAGACCCTGATAAGCCTACCGACAAACGCATCAGAACTACTCGTCCTTCTTTTGCTTCGATAATAGGAGAAGTGGTTATGGTGAAGAACATGCAGAACCTTTTCTCAGCCTTGGAGCCTTTGCTTAGACGAGTGGTGACAGAAGAGGTGGAACGCGTAATAAGGCATTATGGTGCACATCCCATAACTCGGTCTCCTTCGTTGAGAATCGCAGCGGCATCAGAACAGCCACAATCAAGGCTTCAACTAATGTTCGACAAAAAGCTCTCAGTCCCCATTTTCACAGGGACCAGGATTCTGGACAGCGATGGGAACCCCATCCACGTGGTTCTGGTGGAGAAGAACGGCGACCACACTATTCGAACCAGTCTTCCGAACCCCATCAAGCTGGAACTGGTGGTTCTTGACGGAGACTTCGAGGCGGAGGAGAAGGAGTGGTGGACGAGCGAGGAGTTCAATAGAAATATAGTGAAGGAGAGAACTGGCAAGAGGCCTTTACTCACCGGCGAGTTGAACCTCACCATGAGGGACGGTATTGCACCCACCGGAGACATTGAGTTTACCGACAATTCTAGCTGGATTCGTAGTCGGAAGTTTAGGGTCGCCGTCAGAATCGCCTCGGGGAGTAATTTCAGTGCTCGGATTCGCGAAGGCATGACCGAGGCGTTTGTCGTTAAGGATCACCGTGGTGAATTGTACAAGAAACACCATCCACCAATGTTGCAAGACGAAGTGTGGCGGCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAGAAGTTGTCCGCTGAGGGCATTCACACAGTGCAAGACTTTCTCAAGTTGTCTGTTGTTGATCCTCAGAAGCTCAGAAAGATATTAGGGATTGGGATGTCGGAGAAAATGTGGGAGGTAACAATCAAGCATGCGAGGACTTGTGAGATAGGGAACAAGCTCTACTTGTACCGTGGTTCCCAATTTGCCATCTATCTCAATCCAATCTGCCAATTAATTAAAGCTGAAATGAATGGCCACGTCTTCTGGGGCAAAGAAATCACCAATAATATGAATAGGACCTATATAGAGAAATTGGTGCGAGAAGCCCATGCGAGATGGAGCTGCTTGGATGAAATTGATGGACTTTTGAATGATAACACTCCCTTATTAATCCAAGGTGAAAGCGTGGAGCAATATGCAAACAACCACCTTCATCAAGCGAGTGTGATGGCATATGATGAGAACGATTTCATGGGTGAAAAATGCAGAGAGGTGGTGGGAAGCAACGCACAAATTGGAGGATGCAGTGAGTGGACGCTGAATCCAACGTTCACACCATCTTCATTCGTCAATGGCATCTCTTGTAGCTTCTCAGACTCACAGTCCGACGGCGATCTGACGCCCTCTGCCTCTTTCATTGATGGGCCTGGGCCTGCAACTAGGTGGCCTTAG	1461	0.4832	MAAKRFFDDSDQDPDKPTDKRIRTTRPSFASIIGEVVMVKNMQNLFSALEPLLRRVVTEEVERVIRHYGAHPITRSPSLRIAAASEQPQSRLQLMFDKKLSVPIFTGTRILDSDGNPIHVVLVEKNGDHTIRTSLPNPIKLELVVLDGDFEAEEKEWWTSEEFNRNIVKERTGKRPLLTGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRIASGSNFSARIREGMTEAFVVKDHRGELYKKHHPPMLQDEVWRLEKIGKDGAFHKKLSAEGIHTVQDFLKLSVVDPQKLRKILGIGMSEKMWEVTIKHARTCEIGNKLYLYRGSQFAIYLNPICQLIKAEMNGHVFWGKEITNNMNRTYIEKLVREAHARWSCLDEIDGLLNDNTPLLIQGESVEQYANNHLHQASVMAYDENDFMGEKCREVVGSNAQIGGCSEWTLNPTFTPSSFVNGISCSFSDSQSDGDLTPSASFIDGPGPATRWP	486

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g0187	486	PANTHER	OS02G0177800 PROTEIN	1	477	IPR012416	GO:0005516
	Bisa03g0187	486	MobiDBLite	consensus disorder prediction	1	22	-	-
	Bisa03g0187	486	Pfam	Calmodulin binding protein central domain	251	317	IPR046830	-
	Bisa03g0187	486	Pfam	Calmodulin binding protein-like N-terminal domain	92	239	IPR046831	-
	Bisa03g0187	486	Pfam	Calmodulin binding protein C-terminal domain	322	381	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g0187	Bisa-ChrBisa03	2442743	2445932	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g0187	3	477	Calmodulin-binding Proteins	AT5G57580	43.381	4.12e-120	364