Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0167 ATGCCTGTTGTTACGGAAGCCTCAGCAATCGCTCAACACATTAAATGTAGAAGAACCAGAAACCAATTCGTCCGTCCCATTCCAGAAGCAGATCCAACTCGTCCAGTCCCTTCTATAATCCAATCCACACGCTGCAAATCCACCATTTCCTCTCTTCTCCTCTCTACTTTCTCTAACAACCCGTCGAATGAAACTATACAGGGCAACAACATCACGGGCGGTGGCCATAACAAGAAGAAGAACAATTTCTCGGCGGCGACCTTCAGAGGACTCGGATGCACCGCCGGTGCGTCGCAACAGGTGTCGGTGCCAGCGGTGATTAGGACATCGGCGGATTGGCAAGGGAAAAAGGCCAGAAAGAAGAAGCACAAAAGGAATGGAGCCAAGAACAACAACGGCAACAGGACCTGTCCTGGCGTGCTTGACGGTTCTGGTTTTAACTCTACTAATTGTGTTGATTTTCAAGACGTTTGGTGTGGCCCCGGAATTGGGTTTTCCGCAGATGCTGCCGCATCAGTTGATTGCGTTGTGGCGAGGAAGAATGCGTCTGCAAGAGGGAAGATCGATGTGGAGAGGATAACCCACAGGGAGCGTCTATCTTATCTTGGAAGGCGAAGTGTAAACCCAGAAACCATCTCCTTTCTGGATAGTGATCCTGATATCTTCCCAACACGCCCTGCTGCTTCCGATTCTTTTGGAACTGCCAGATACTATCGTCATGCTCGACACCCTTCCTCTGAAGGTTTTGCTGAGATAATGTTGCTGCAAGGAGGCCTGCTAATGGGGGGAATGCTAGATTCACACGACCAATTTAGAGACTTGAGACTTGATGTTGACAACATGTCATACGAGCAACTGCTTGAGCTCGGTGAGAGAATTGGTTATGTGAACACTGGACTCAAAGAAGATGAGATAGGACGCCACATTCATAAAACTCAGCTTCCATTTCTAAGTGATACATCGAAGCATCATATTACCAAAAAGTGCAGCATTTGTCAGGAGGAATATGAAGGAGGAGATGTGGTGGGGAAGCTAAATTGTGAACACAGCTATCACTATCAGTGCATCAGACAATGGCTTGCACACAAAAATTTCTGCCCAGTCTGTAAGCAAGACGTGGTGGTTCGTCACTGA 1134 0.478 MPVVTEASAIAQHIKCRRTRNQFVRPIPEADPTRPVPSIIQSTRCKSTISSLLLSTFSNNPSNETIQGNNITGGGHNKKKNNFSAATFRGLGCTAGASQQVSVPAVIRTSADWQGKKARKKKHKRNGAKNNNGNRTCPGVLDGSGFNSTNCVDFQDVWCGPGIGFSADAAASVDCVVARKNASARGKIDVERITHRERLSYLGRRSVNPETISFLDSDPDIFPTRPAASDSFGTARYYRHARHPSSEGFAEIMLLQGGLLMGGMLDSHDQFRDLRLDVDNMSYEQLLELGERIGYVNTGLKEDEIGRHIHKTQLPFLSDTSKHHITKKCSICQEEYEGGDVVGKLNCEHSYHYQCIRQWLAHKNFCPVCKQDVVVRH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0167 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 375 IPR013083 -
Bisa03g0167 377 SUPERFAMILY RING/U-box 328 375 - -
Bisa03g0167 377 ProSiteProfiles Zinc finger RING-type profile. 329 370 IPR001841 -
Bisa03g0167 377 MobiDBLite consensus disorder prediction 115 129 - -
Bisa03g0167 377 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 87 373 IPR045191 GO:0061630
Bisa03g0167 377 SMART ring_2 329 369 IPR001841 -
Bisa03g0167 377 Pfam Ring finger domain 328 370 IPR001841 -
Bisa03g0167 377 MobiDBLite consensus disorder prediction 112 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0167 Bisa-ChrBisa03 2028861 2032785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0167 1 284 C3H Transcription Factor Family AT1G73760 42.157 3.72e-55 181