Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0130 ATGCTGGCAGCTGATCCAAGAGGAGTTTTGTTCAAAGTGTACTGGGCCTTGAGCCTCTTGATGAAAAAAAGAAAAAGATATAGACAAAGAATACTTTTTGGCGGTGTTCGCAAGTCCACTTTTCCCCTTCTCCAAAAAGCAAAAGAACTTCAATCTCTCAGATCCTTCCGGACGATGCCCCAACTCGTGGAGACCTATGCCTGCATGCCATCCACGGAGCGAGGCCGTGGAATTCTAATTTCCGGCGATTCCAAATCCAATTCCATTGTTTATACCAATGGCAGATCGGTCATTCTCATGAACCTCGACAATCCACTTCAGGTTTCGGTTTATGGGGAGCACGCGTACCCGGCCACTGTAGCTCGGTACTCCCCCAATGGCGAGTGGATCGCGTCCGCTGATGTGTCTGGCACGGTGAGGATTTGGGGAACACGCAACGACTTCGTTTTGAAGAAGGAGTTCAAGGTGTTGTCGGGTCGGATCGACGATCTACAGTGGTCGCCAGACGGTCTGAGAATCGTGGCTTGTGGTGAAGGGAGGGGGAAGTCATTAGTGCGCGCTTTTATGTGGGATTCAGGTACCAATGTTGGCGAATTTGATGGCCATTCAAGGCGAGTTCTAAGTTGTGCTTATAAGCCAACAAGACCTTATCGCATTGTCACATGTGGAGAGGATTTTTTGGTGAACTTTTATGAAGGACCACCGTTCAGATTTAAGCTATCTCACAGGGATCATTCAAATTTTGTCAATTGTGTAAGATATTCTCCAGATGGAAGTAAATTTTTAAGTGTAAGCTCCGACAAAAAGGGTATCATATATGATGGGAAGAGTGGAGAGAAGATTGGCGAGCTGTCTTCTGAAGGTGCCCATACTGGCAGTATCTATGCTGTTAGCTGGAGTCCTGATGGCAAACAAGTTCTTACTGTATCTGCAGACAAGTCAGCAAAAATATGGGACATATCTGAGGACAATATTGGAAAGGTGAAGAAAACGTTGACTTGTCCTGGCTCAGGTGGAATTGAAGACATGCTAGTTGGATGTCTATGGCTAAATGATCATCTAGTCACTGTTTCTCTTGGCGGGGTAATATCTGTATTTTTAGCAAGTAATCTTGATAAAGCCCCAACAACCTTATCTGGACATATGAAAAATGTATCCTCTTTGACTACTCTTCGTAGCAACCCTAGAGTGCTTTTGTCTAGCAGCTATGATGGTTTAATATTTAAGTGGGTTCAAGGGATTGGATATAGTGGTAAATTACAAAGAAAGGAGAATCCTCAAATCAAGTTTTTAGCAGCTGCTGAAGAAGAAATTGTTACATCTGGATTCGATAATAAGATATGGCGAGCTTCTTTACATGAGGATCGGTGTGGAGATGCTGAGGCCATTGATATAGGAAGTCAACCAAAGGACTTGAGTGTTGCACTTCTATCTCCTGAGCTAGCTCTGGTTTCAATTGATACAGGAGTTGTCATGCTACGTGGTACAAAAATCGTGTCAACCATTAATCTTGGGTTTGTTGTGACAGCATCTGCTGTTTCACCTGATGGAAGTGAAGCTATTATTGGTGGACAGGATGGTAAATTGCATATATATTGTATTTCTGGTGATACTCTTACAGAAGAAGCAGTCATTGAGAAACACCGAGGTGCTATTAGTGTCATACGTTACTCTCCAGATGTTTCCATGTTTGCATCAGGGGATGTCAATCGAGAAGCAATAGTGTGGGACAGGGCATCTAGAGAGGTGAAGCTTAAGAACATGTTATACCACACTGCTCGAATTAACTGCCTCGCTTGGTCTCCTGACAGTAGTAGGATTGCTACTGGATCACTCGACACATGTGTCATTATATATGAAATTGACCAGCCAGCATCTACTAGAATTACCATAAAGGGTGCTCACTTAGGTGGGGTTTATGGGTTGGTTTTCACTGATGAGTATAGTTTGGTGAGCTCAGGCGAGGATGCTTTCATCCGTGTTTGGAGGATAACCCCACCATGA 2004 0.4391 MLAADPRGVLFKVYWALSLLMKKRKRYRQRILFGGVRKSTFPLLQKAKELQSLRSFRTMPQLVETYACMPSTERGRGILISGDSKSNSIVYTNGRSVILMNLDNPLQVSVYGEHAYPATVARYSPNGEWIASADVSGTVRIWGTRNDFVLKKEFKVLSGRIDDLQWSPDGLRIVACGEGRGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPYRIVTCGEDFLVNFYEGPPFRFKLSHRDHSNFVNCVRYSPDGSKFLSVSSDKKGIIYDGKSGEKIGELSSEGAHTGSIYAVSWSPDGKQVLTVSADKSAKIWDISEDNIGKVKKTLTCPGSGGIEDMLVGCLWLNDHLVTVSLGGVISVFLASNLDKAPTTLSGHMKNVSSLTTLRSNPRVLLSSSYDGLIFKWVQGIGYSGKLQRKENPQIKFLAAAEEEIVTSGFDNKIWRASLHEDRCGDAEAIDIGSQPKDLSVALLSPELALVSIDTGVVMLRGTKIVSTINLGFVVTASAVSPDGSEAIIGGQDGKLHIYCISGDTLTEEAVIEKHRGAISVIRYSPDVSMFASGDVNREAIVWDRASREVKLKNMLYHTARINCLAWSPDSSRIATGSLDTCVIIYEIDQPASTRITIKGAHLGGVYGLVFTDEYSLVSSGEDAFIRVWRITPP 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 545 577 - -
Bisa03g0130 667 FunFam Actin-interacting protein 1 69 395 - -
Bisa03g0130 667 SUPERFAMILY WD40 repeat-like 86 410 IPR036322 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 111 152 IPR001680 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 632 667 IPR001680 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 287 328 IPR001680 GO:0005515
Bisa03g0130 667 Gene3D - 69 395 IPR015943 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 588 622 - -
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 545 577 IPR001680 GO:0005515
Bisa03g0130 667 PANTHER WD-REPEATCONTAINING PROTEIN WDR1 61 664 - -
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 283 IPR001680 GO:0005515
Bisa03g0130 667 FunFam Actin-interacting protein 1 396 664 - -
Bisa03g0130 667 SMART WD40_4 624 663 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 235 274 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 147 191 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 582 620 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 277 319 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 371 411 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 495 533 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 104 143 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 192 232 IPR001680 GO:0005515
Bisa03g0130 667 SMART WD40_4 538 577 IPR001680 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 632 667 - -
Bisa03g0130 667 SUPERFAMILY WD40 repeat-like 352 665 IPR036322 GO:0005515
Bisa03g0130 667 CDD WD40 114 407 - -
Bisa03g0130 667 ProSitePatterns Trp-Asp (WD) repeats signature. 306 320 IPR019775 -
Bisa03g0130 667 Gene3D - 65 664 IPR015943 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 287 321 - -
Bisa03g0130 667 Pfam WD domain, G-beta repeat 243 269 IPR001680 GO:0005515
Bisa03g0130 667 Pfam WD domain, G-beta repeat 121 142 IPR001680 GO:0005515
Bisa03g0130 667 Pfam WD domain, G-beta repeat 285 319 IPR001680 GO:0005515
Bisa03g0130 667 Pfam WD domain, G-beta repeat 591 619 IPR001680 GO:0005515
Bisa03g0130 667 ProSiteProfiles Trp-Asp (WD) repeats profile. 588 629 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0130 Bisa-ChrBisa03 1611438 1624928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0130 243 567 Eukaryotic Initiation Factors Gene Family AT2G46290 22.767 5.93e-08 53.5