Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0129 ATGAGAAGGCCTTGCTGTGAGAAGGAAGAAACTCAGAGAGGATCGTGGTCCAAGGAAGAGGACCAGAAGCTCATCGCTTACATACAGAAACACGGTGAAGGTTGCTGGCGTTCCCTTCCTCAGGCTGCAGGGTTGCGTCGCTGTGGCAAGAGCTGCAGGTTGAGATGGTTAAACTATCTAAGGCCTGACCTTAAACGTGGAGACTTTGGAGAAGATGAGGAGGACTTGATTATCAGGCTTCATGCTCTTCTTGGCAACAGGTGGTCACTGATAGCTCGAAGACTACCAGGAAGGACAGATAATGAGGTGAAGAATTATTGGAACTCTCATATAAGGAAGAAGCTAATTCAGATGGGTCATGATCCCAATAATCTTCATCGCTTTAGAGGCTCTACTGTTAGAAATGGAAAATCGTTGGACTCTAATAGTGATCACGAGACTCCTAACAAGCAAGTAAACTTACTGGACGCCAATAGTGATGATAAACAGGTGTTTGATTCAACAAGCGGGCCAAACTGCAACCTCAACGCCTTGCCTGACTTGAATCTTGATCTTACACTCTGTACTAATTACTCTTGTGAGAGCAAGACTAATTAG 597 0.4506 MRRPCCEKEETQRGSWSKEEDQKLIAYIQKHGEGCWRSLPQAAGLRRCGKSCRLRWLNYLRPDLKRGDFGEDEEDLIIRLHALLGNRWSLIARRLPGRTDNEVKNYWNSHIRKKLIQMGHDPNNLHRFRGSTVRNGKSLDSNSDHETPNKQVNLLDANSDDKQVFDSTSGPNCNLNALPDLNLDLTLCTNYSCESKTN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0129 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Bisa03g0129 198 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bisa03g0129 198 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 153 - -
Bisa03g0129 198 Gene3D - 68 152 - -
Bisa03g0129 198 SMART sant 12 62 IPR001005 -
Bisa03g0129 198 SMART sant 65 113 IPR001005 -
Bisa03g0129 198 MobiDBLite consensus disorder prediction 130 151 - -
Bisa03g0129 198 SUPERFAMILY Homeodomain-like 12 107 IPR009057 -
Bisa03g0129 198 CDD SANT 71 111 IPR001005 -
Bisa03g0129 198 FunFam MYB-related transcription factor 12 65 - -
Bisa03g0129 198 CDD SANT 15 60 IPR001005 -
Bisa03g0129 198 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bisa03g0129 198 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Bisa03g0129 198 FunFam MYB transcription factor 67 128 - -
Bisa03g0129 198 Gene3D - 13 65 - -
Bisa03g0129 198 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa03g0129 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0129 Bisa-ChrBisa03 1606169 1607291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0129 2 187 MYB Transcription Factor Family AT4G38620 52.427 2.21e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g0129 Myb_DNA-binding 5.6e-16 CL0123