Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0121 ATGGACCCAACCTCGATCCCTCCTCCGGCCACCATCTCCGCTCCTATCTCTCTCTTCCCCGCCGAACCTAACACTAACAACCATGTTCCTCTACCCACCACCGCTAATCCAACTCCTACTCTTCCTCCTGTTCCAGTTTCTGCCCAGGCTCAAGCTCAACCTCCAGACGCGGCGCCGAACCACCCTCCCTATTCTGAGATGATATATGCAGCAATCGAGGCACTGAAGGAGAAAAATGGGTCCAGCAAGAGAGCTATCGCCAAATACATAGAGCAAGCGTACAAGGACCTTCCTCCGACTCACTCGGCCTTGTTGACTTACCACCTTCAGCGCTTGAAGAACAATGGTCTCCTGGTTATGGTCAAGAAATCATATAAGCTACCTAGATCTGATGGTTCCCCTTCTACTGCCCAGAGGGGACGTGGCAGACCTCCCAAGCTCAAGCCGCAGCCTGGTCAGGCTCAAGCCCAGGCCCAACCCCAGCCCGACTTTCAGATGGAGCCCGTGCCCAACGTGCCGCAAAATCTGCAAAATGCTGAGCCCGTGTGGGTTGCGCTTGGGCTTGCTGATGAGCCCGCTGAGGTGAAGAAGAGGGGCCCGGGTCGTCCGAGGAAGAGCATGGCAGTAGAGGGACTGGGCCTGCCCGGGCCCGTTGTGCGGAGAGGTCGTCCACCGGGAACCGGGAGATCCAGGTTGCCGAAGAGGCCCGGGCGTCCTCCGAAGCCTAAATCTGTAATGGCAATCTCGAATGGACTGAAGCGCCGACCGGGTCGCCCGCCCAAAATCCAATCTAAACCTACTGTCATTCCCTTTGCGGCTCCTGCTCCTACCGCACCGGCTGTGCCCACCGGACAGGGAATTGCACCGGATGCTACTGCACCAATTGTAACTCCGAGACGTAGAGGACGGCCGAAGAAGTATGGTTCTCTAGTGTCCACTGTGGGAGCTCCATCTCATGCTATTGCTCGTGGCCGTGGTCGCGGACGAGGACGAGGACGTGGCGTCTATCGGAGCTCCACTGGAAGGCCTGTTGGCCGCCCAAAGAAGGGAACAACTACTGATCTTAGTGCACAAAAGGTTGCTATTGAAGATCTCAAGAGGAAACTTGATTATTTTCAATCAAAAGTGAAAGAATCTCTCGGTGTGATTAAGCCTCATTTTAACCATGAAAGCCCAGTCACTGCAATTGCAGCAATTCAAGAGTTAGAAATACTGGCGACTATGGACCTCAATGCACCATTAACTGATGATACACAGCAACTGCCGCAAATGCCTCAGTCGCAGCTGCAGCCACAGTCACAGCCACCGCCACAGCATCATCATCATCATCAGCAGCAGCCTGATTTTCAGCCACAGCAACTGCCACAGCAGCAGATGTATCATCAGTCATTGCCACAGCCGCATATGTATCAGCAGCCATTTCCGCAGCCACAGATTTATCAACAGCAACTGCAGCAGCCTCAGATGTATCAACAGCAACTGCCACAAGTGCCATTGCAGTCACAGTCACAGCAATTGTTTCAGCCACATTAA 1533 0.5408 MDPTSIPPPATISAPISLFPAEPNTNNHVPLPTTANPTPTLPPVPVSAQAQAQPPDAAPNHPPYSEMIYAAIEALKEKNGSSKRAIAKYIEQAYKDLPPTHSALLTYHLQRLKNNGLLVMVKKSYKLPRSDGSPSTAQRGRGRPPKLKPQPGQAQAQAQPQPDFQMEPVPNVPQNLQNAEPVWVALGLADEPAEVKKRGPGRPRKSMAVEGLGLPGPVVRRGRPPGTGRSRLPKRPGRPPKPKSVMAISNGLKRRPGRPPKIQSKPTVIPFAAPAPTAPAVPTGQGIAPDATAPIVTPRRRGRPKKYGSLVSTVGAPSHAIARGRGRGRGRGRGVYRSSTGRPVGRPKKGTTTDLSAQKVAIEDLKRKLDYFQSKVKESLGVIKPHFNHESPVTAIAAIQELEILATMDLNAPLTDDTQQLPQMPQSQLQPQSQPPPQHHHHHQQQPDFQPQQLPQQQMYHQSLPQPHMYQQPFPQPQIYQQQLQQPQMYQQQLPQVPLQSQSQQLFQPH 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0121 510 MobiDBLite consensus disorder prediction 415 510 - -
Bisa03g0121 510 MobiDBLite consensus disorder prediction 447 510 - -
Bisa03g0121 510 FunFam Histone H1.2 57 137 - -
Bisa03g0121 510 PANTHER HISTONE H1 46 263 - -
Bisa03g0121 510 Coils Coil 72 92 - -
Bisa03g0121 510 CDD H15 58 137 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0121 510 Gene3D - 56 138 IPR036388 -
Bisa03g0121 510 MobiDBLite consensus disorder prediction 18 34 - -
Bisa03g0121 510 SMART AT_hook_2 341 353 IPR017956 GO:0003677
Bisa03g0121 510 SMART AT_hook_2 298 310 IPR017956 GO:0003677
Bisa03g0121 510 SMART AT_hook_2 138 150 IPR017956 GO:0003677
Bisa03g0121 510 SMART AT_hook_2 253 265 IPR017956 GO:0003677
Bisa03g0121 510 SMART AT_hook_2 218 230 IPR017956 GO:0003677
Bisa03g0121 510 SMART AT_hook_2 197 209 IPR017956 GO:0003677
Bisa03g0121 510 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 60 129 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0121 510 MobiDBLite consensus disorder prediction 194 352 - -
Bisa03g0121 510 MobiDBLite consensus disorder prediction 125 174 - -
Bisa03g0121 510 MobiDBLite consensus disorder prediction 1 63 - -
Bisa03g0121 510 SUPERFAMILY "Winged helix" DNA-binding domain 57 130 IPR036390 -
Bisa03g0121 510 SMART h15plus2 58 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0121 510 MobiDBLite consensus disorder prediction 415 440 - -
Bisa03g0121 510 Pfam linker histone H1 and H5 family 61 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Bisa03g0121 510 MobiDBLite consensus disorder prediction 152 174 - -
Bisa03g0121 510 PRINTS AT-hook-like domain signature 138 148 IPR017956 GO:0003677
Bisa03g0121 510 PRINTS AT-hook-like domain signature 296 307 IPR017956 GO:0003677
Bisa03g0121 510 PRINTS AT-hook-like domain signature 339 349 IPR017956 GO:0003677
Bisa03g0121 510 PRINTS Histone H5 signature 74 91 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bisa03g0121 510 PRINTS Histone H5 signature 47 68 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Bisa03g0121 510 PRINTS Histone H5 signature 193 212 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0121 Bisa-ChrBisa03 1496847 1499620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0121 49 169 Single Myb Histone (SMH) Gene Family AT1G49950 33.058 2.73e-07 50.4