Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0075 ATGAACCTAGATATTGTTCAAATTGCAAAACCAAAAACTAGATTCCAGCTTCTATCTCGTGGTCTGGTTTGCGATTCAATTGAGATAGTCTTTAGTTCAGTGTCGGCGGAGACGAGGTTTGTGTGTGGAACATCACATACAATGAGCTTTCAAGCCCGACCAGAAAGAAGGGATAGGTCCAGGCTTCCTGTCCAAGGTCCTCGTCAGGAATGGGTTCCCAGAGCATCTGCTGCTGCCACCACCACCACCACCACTACCTCTTTCCCCCCCACCACCTCTGCCCTGCCATCAAAATCGCAGTTAGATCAAAATGGTGATGCTGGTTGCTCAAACAATTGTGCTGCTCCACCAGCAAGTCGGCACAAAAGCAATCATGCATCAAAGGATTACACAAGCCGTGCTATGAATCAAAGAAAGGAAAGGGAAAAAGGAAGGGGTGAGAATCAGGCGGGAAAAGCAGTGAGGGACTCTAATTTGCCTCAACTGTTGCAAGAGATTCAGGAGAAGCTCATGAAAAGTTCTATAGAGTGCATGATTTGCTATGACATGGTCCGTAGATCTGCACATATCTGGTCTTGCTCCAGCTGCTACTCTATCTTCCACCTGAATTGTATAAAGAAGTGGGCTCGGGCACCCACTTCTGTTGATCTGTCTGCAGAAAAGAATCAAGGATTGAATTGGCGGTGTCCTGGCTGTCAATCTGTACAGCTAACATCATCAAGGGAGATTAGGTATGTATGCTTTTGTGGAAAGAGGCCTGACCCACCATCTGATTTATATCTCACGCCACATTCTTGTGGAGAACCATGTGGGAAGCCTCTTGAGAGGAATGTGCTGGTAAGTGGAGGGAAAGGGAGTAAGGAGGATCTTTGCCCTCATGTTTGTGTATTGCAATGTCATCCAGGTCCTTGCCCTCCTTGTAAAGCATTTGCACCACCGCGTTTGTGTCCTTGTGGGAAGAAAACAATTACCACACGTTGCTCTGAACGGCCCTCTGTTCTTAGTTGTGGTCAACGTTGTGATAAGCTTCTTGAGTGTGGACGCCATCTGTGCGAACGCACTTGTCATGTGGGTCCTTGCGATCCTTGTCAGGTTCTAATCAATGCCTCTTGCTTCTGCAATGAAAAAGTGGAGGTTATTCTTTGTGGGGATATGGCTGTAAAGGGTGAAATTAAAGCAGAAGGTGGTGTTTTTTCCTGTGGTACCAATTGTGGGAGGAAACTTAGTTGTGGTAATCACTTTTGTAATGAGATTTGCCATCCAGGAAACTGTGGGGAGTGTATCCTTTTACCAAAGCAGATTAAGACATGCTGTTGTGGGAAAACAAGATTGGAGGAGGAACGGCAGAGTTGTCTGGATCCGGTACCAACCTGTTCACAAGTATGTGACAAGCCCCTTCCATGTGGGATGCATCACTGTAAAGAGGTTTGTCATGCTGGTGATTGTCCACCGTGTTTGGTTCCGGTCTCCCAAAAGTGTCGGTGCGGCTCAACTTCCCGAACTGTAGAGTGCTATAAGACAACTAGGGAGAATGAGAAATTTACTTGTGAAAAACCTTGTGGGCGGAAAAAGAACTGTGGAAGGCATCGATGTAGTGAACGGTGCTGTCCACTTTCTAATCCTAATAATCATCTAAGTGGGGATTGGGATCCTCACTTTTGTTCCATGCCATGTGGAAAGAAGCTAAGGTGTGGGCAACATGCGTGTGAATCTCTGTGTCACAGTGGCCATTGTCCACCTTGTCTCGAAACTATCTTCACTGATTTGACGTGTGCTTGTGGTAGGACTTCAATTCCTCCTCCCTTGCCATGTGGTACACCTCTTCCCTCATGTCAACTTCCGTGTTCAGTACCTCAGCATTGTGGTCATACTGCCTCCCATAGCTGCCATTTTGGAGATTGCCCACCTTGTTCAGTGCCTGTAGCAAAAGAATGTATTGGTGGGCATGTGGTTCTTAGGAATATACCTTGTGGGTCAAAGGATATTAGATGCAATAAACTCTGTGGAAAGACCAGACAGTGCGGGTTACATGCTTGTGGCAGAACTTGTCATCCTTCACCTTGTGATAATCCATCTGGTTCCGAGCAAGGTTCCCGAGCATCTTGTGGTCAAACATGTGGTGCTCCTAGAAGAGACTGCAGGCATACATGTACAGCTGCATGTCACCCTTCGTCTCCATGCCCCGATATAAGATGTGAGTACCCTGTTACAATTACTTGTTCTTGCGGCCGTATAACGGCAAATGTTCCTTGTAGTGCTGGTGGTAGTGGTAATTATAATGCTGACTCCATACATGAAGCTTCCATAGTTCAAAAGTTGCCTGTGCCACTTCAACCAGTGGAATCCAATGGCAAATTGATTCCCCTTGGACAAAGAAAGCTTATATGTGATGATGAATGTGCTAAATTGGAGCGTAAAAGGGTTCTTGCTGATGCTTTTGATGTTTCCACTCCAAACTTGGATTCTCTTCATTTTGGGGAGAACTCTGGTGCTTCTGAATTGCTTTCAGACATGTTCAGGCGTGATCCTAAGTGGGTTTTATCTGTGGAGGAGAGATGCAGATTTTTAGTTCTTGGCAAGAGCAAAGGAGTTACTCATGGTTTAAAAGTCCATGTTTTCTGCCCTATGCTGAAGGATAAGAGAGATGCAGTGAGGGTGATTGCTGAGAGATGGAAGCTTGCCGTGAATGCTGCTGGTTGGGAACCAAAGCGTTTTGTCATAATTCATGTTACCGCAAAGTCAAAGGCTCCTGCTCGTGTGCTTGGGGTTAAGGGTACCTCAACTGTAAATGCGCCCCTTCCTCTGGCATATGATTCCTTAGTAGACATGGACCCTCGGCTTGTTGTCTCTTTTCCAGACCTACCAAGGGATGCTGATATAAGTGCTTTAGTGTTGAGGTTTGGTGGTGAATGTGAACTTGTTTGGTTGAATGACAAAAACGCATTGGCTGTTTTTAATGATCCTGCCCGAGCTGCAACTGCTATGAGGAGGTTGGATCATGGAACAGTTTATCATGGTGCTGTAGTGGTTGTCCCAAATGTTGGGGCATCAACGGCATCGTCAGCTACTAGTGCCTGGGGAGGAGCAGGGATGGTGAAAGAAGGAGGAGCACTGGCAGTATTGAAGGGTAATCCATGGAAAAAGGCTGTAGTTCAGGAGCCGGGTTGGAGAGAAGATTCTTGGGGTGATGAAGAGTGGTCTACTGGTTCTGCTAATATTCAGCCCTCTGCCTGGACGAAAGAAGCTCCAAAAGCCCCAATTTCTGCTTCAGTCAACCGGTGGAGTGTCTTAGACGAAGAATCATCTTCAAGTTCATCTGTTGCGATTTCTGCAAAACACTCTGCTAGTTCATCAGCTGTCCCGACGTTGGAATCCGATGCAGTTGGCTCAATTCCACATGGGCAGCAAGGAGGGATCGTTAATGCTGCAGAAGTTTCTGAAGTAGTCGATGATTGGGAGAAAGCTTATGCATGA 3474 0.4643 MNLDIVQIAKPKTRFQLLSRGLVCDSIEIVFSSVSAETRFVCGTSHTMSFQARPERRDRSRLPVQGPRQEWVPRASAAATTTTTTTSFPPTTSALPSKSQLDQNGDAGCSNNCAAPPASRHKSNHASKDYTSRAMNQRKEREKGRGENQAGKAVRDSNLPQLLQEIQEKLMKSSIECMICYDMVRRSAHIWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNQGLNWRCPGCQSVQLTSSREIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLERNVLVSGGKGSKEDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCSERPSVLSCGQRCDKLLECGRHLCERTCHVGPCDPCQVLINASCFCNEKVEVILCGDMAVKGEIKAEGGVFSCGTNCGRKLSCGNHFCNEICHPGNCGECILLPKQIKTCCCGKTRLEEERQSCLDPVPTCSQVCDKPLPCGMHHCKEVCHAGDCPPCLVPVSQKCRCGSTSRTVECYKTTRENEKFTCEKPCGRKKNCGRHRCSERCCPLSNPNNHLSGDWDPHFCSMPCGKKLRCGQHACESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPLPSCQLPCSVPQHCGHTASHSCHFGDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHPSPCDNPSGSEQGSRASCGQTCGAPRRDCRHTCTAACHPSSPCPDIRCEYPVTITCSCGRITANVPCSAGGSGNYNADSIHEASIVQKLPVPLQPVESNGKLIPLGQRKLICDDECAKLERKRVLADAFDVSTPNLDSLHFGENSGASELLSDMFRRDPKWVLSVEERCRFLVLGKSKGVTHGLKVHVFCPMLKDKRDAVRVIAERWKLAVNAAGWEPKRFVIIHVTAKSKAPARVLGVKGTSTVNAPLPLAYDSLVDMDPRLVVSFPDLPRDADISALVLRFGGECELVWLNDKNALAVFNDPARAATAMRRLDHGTVYHGAVVVVPNVGASTASSATSAWGGAGMVKEGGALAVLKGNPWKKAVVQEPGWREDSWGDEEWSTGSANIQPSAWTKEAPKAPISASVNRWSVLDEESSSSSSVAISAKHSASSSAVPTLESDAVGSIPHGQQGGIVNAAEVSEVVDDWEKAYA 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0075 1157 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 112 1064 IPR034078 GO:0003700
Bisa03g0075 1157 CDD NF-X1-zinc-finger 336 384 - -
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 410 427 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 468 485 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 621 638 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 526 537 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 346 364 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 564 581 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 293 308 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 Pfam NF-X1 type zinc finger 674 689 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 MobiDBLite consensus disorder prediction 75 110 - -
Bisa03g0075 1157 CDD RING-CH-C4HC3_NFX1-like 175 233 - -
Bisa03g0075 1157 CDD NF-X1-zinc-finger 458 506 - -
Bisa03g0075 1157 ProSiteProfiles Zinc finger PHD-type profile. 174 235 IPR019787 -
Bisa03g0075 1157 CDD NF-X1-zinc-finger 702 753 - -
Bisa03g0075 1157 SUPERFAMILY RING/U-box 166 236 - -
Bisa03g0075 1157 CDD NF-X1-zinc-finger 554 606 - -
Bisa03g0075 1157 CDD NF-X1-zinc-finger 611 659 - -
Bisa03g0075 1157 MobiDBLite consensus disorder prediction 48 156 - -
Bisa03g0075 1157 MobiDBLite consensus disorder prediction 122 150 - -
Bisa03g0075 1157 SMART znfxneu3 713 734 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 621 639 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 346 365 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 291 309 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 564 583 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 468 487 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 674 704 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 SMART znfxneu3 410 429 IPR000967 GO:0005634|GO:0008270
Bisa03g0075 1157 CDD NF-X1-zinc-finger 400 445 - -
Bisa03g0075 1157 CDD NF-X1-zinc-finger 266 329 - -
Bisa03g0075 1157 ProSiteProfiles Zinc finger RING-type profile. 177 233 IPR001841 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Bisa03g0075 zf-NF-X1 2.9e-05 No_clan