Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0067 ATGGAAAGAAAGAGCATAGAAAGGAGAAGTAGAGAAGAAGAAGAAGAGCAGAGACACCATGGAAGCCCTCCTCATCTCTTTCCAAACTTGGTGATTCATCCCCATATCTGGTGGTACAGGGTTTGGAAGCATTTCATTCTGATATGGGCAGTGTATTCCTCCTTCTTCACTCCCATGGAATTCGGCTTCTTCAGAGGGTTGCCGGAGGAAATTTTCCTCCTTGACATTGCCGGCCAAATCGCTTTCCTCATTGACATAGTCGTTCGATTTTTCGTCGCTTATCGTGACACCCACTCTCATTCCTGGGTCTCCAGTCGCCGACAAATCGCCATGAGGTACTTGAAGTCTCGGTTTGTGATTGATTTTCTTAGCTGTCTGCCGTGGGATTATATTTACAAGGCTACTGGCAGGAAAGAGCCAGTTAGGTATCTTCTATGGATTAGGCTAAGTCGGGCATGTAGAGTGACAGAGTTCTTTGAAAGGCTGGAGAAAGATATTAGAATCAATTACATCCTTACTAGAATTGTGAAACTTCTTGTTGTTGAACTCTATTGCACACATACGGCTGCCTGCATCTTCTACTATCTTGCTACCACTATGCCCCCCTCCAAGGAAGGTTATACATGGATAGGCAGCTTGAAGATGGGTGACTACAGCTATTCAGACTTTAGAAATATTAGTCTCTGGAGGCGTTACGTGACATCACTCTACTTTGCAATTGTTACTATGGTAACTGTTGGCTATGGAGATATTCATGCAGTCAATGTCAGGGAAATGATATTTGTCATGATTTTTGTTTCCTTTGACATGATTTTGGGTGCTTATCTTCTTGGTAATATGACAGCATTGATCGTGAAAGGATCAAAAACAGAGAGGTTTAGGGATAAAATGACCCAACTTATCAAGTACATGAATAAAAATAATTTGGACAAACAGATAAGTAAGGAGATTCAAGGCCATTTGCGCTTGCAGTATGATCGCAGTTGCACTGAAGCTGCCATTCTTGAGGATGTTCCAGCCTCTATTCGTGCAAAGATTTCAGTGAATTTGTATGAGCAGTTCATTGAGAAAGTTTCTCTTTTCAAAGGATGCTCTTCGGGGTTCATTAAGCAGATGGCAATCAAAGTCCATGAAGAATTTTTCCTCCCAGGAGAAGTTATTATGGAGGAAGGAGATGTAGTAGATCAACTTTACCTTGTATGTCATGGTGAGCTGGATGAGCTAAGAAGGGATAATAATGAGAAAGGGGAGGTAGTTCAGCAATTTCAAACCTACAGCTCCTTTGGCGAGGTTTCTTTTCTTTGCAACATGCCTCAACCTTGCATGGTTCGTGCCCACGAATTTTGTAAGGTTTTGCGACTTGATAAGCAATCCTTCACAGAAACACTGAAGTTATACTTTTTTGACGGTCGAGTTATCTTGAACAATCTTCTTGAGGGAAAAAACTCCAGTCTTCAGCACAAGGTTTTGGAATCAGACTTCGCCTTGACTATTGGAAACCATGAATCAGAGCTGGCTATGAGAATTAATTGTGCTGCCTATGAGGGCGATTTCTATCTTTTAAAACATTTGATAGGATCTGGAGCAGATCCCAACAAAACTGATTATGATGGAAGATCTCCCTTGCATATCTCTGCTTCTAAAGGATATGTAGATATTGCTTGCTTTCTTATTGAACGAGGAGTGAATATCAATTTTTCAGATAAGTTTGGGAATACTCCCTTGCTTGAAGCCATAAAGAATGGACACGAAGAAGTAGCTTCTTTACTTGTAAATGCGGGGGCTACTTTAACTATTGAAGATGCTGGAAGTTTTCTCTGCATGACTGTTGCAAAGAAGGAGTTGGACCTTTTAAGAAAGGTTTTGGCCCATGGTATTAATCCAAATTCCAGAAACTACGATCAACGAACTCCTCTTCACATAGCTGCCTCAGAGGGTTTGTTTACAGCGGTTGAATTGCTCTTACAGGCAGGAGCAAGTGTTTTATCAAAGGACAGGTGGGGGAATACACCACTTGATGAAGCCCTTATAGGTGGAAATAGGAATATGGTCAAATTACTTGAAGTAGCAAAAATTTCCCAGCTGGCTGAGTTATCCAATAGCTTTCAAGAAACTCATGTAAGCATTCTAACAACTCATACTTGCACTGAGTTTGCAGGGACACTTCTCTCGTCATCAACAGATAAAAGTCCAAAAAAAGAAATGCACGGTATTTCCTTTCCACCCATGGGATCACATTCACAAGAAGGATAG 2253 0.4123 MERKSIERRSREEEEEQRHHGSPPHLFPNLVIHPHIWWYRVWKHFILIWAVYSSFFTPMEFGFFRGLPEEIFLLDIAGQIAFLIDIVVRFFVAYRDTHSHSWVSSRRQIAMRYLKSRFVIDFLSCLPWDYIYKATGRKEPVRYLLWIRLSRACRVTEFFERLEKDIRINYILTRIVKLLVVELYCTHTAACIFYYLATTMPPSKEGYTWIGSLKMGDYSYSDFRNISLWRRYVTSLYFAIVTMVTVGYGDIHAVNVREMIFVMIFVSFDMILGAYLLGNMTALIVKGSKTERFRDKMTQLIKYMNKNNLDKQISKEIQGHLRLQYDRSCTEAAILEDVPASIRAKISVNLYEQFIEKVSLFKGCSSGFIKQMAIKVHEEFFLPGEVIMEEGDVVDQLYLVCHGELDELRRDNNEKGEVVQQFQTYSSFGEVSFLCNMPQPCMVRAHEFCKVLRLDKQSFTETLKLYFFDGRVILNNLLEGKNSSLQHKVLESDFALTIGNHESELAMRINCAAYEGDFYLLKHLIGSGADPNKTDYDGRSPLHISASKGYVDIACFLIERGVNINFSDKFGNTPLLEAIKNGHEEVASLLVNAGATLTIEDAGSFLCMTVAKKELDLLRKVLAHGINPNSRNYDQRTPLHIAASEGLFTAVELLLQAGASVLSKDRWGNTPLDEALIGGNRNMVKLLEVAKISQLAELSNSFQETHVSILTTHTCTEFAGTLLSSSTDKSPKKEMHGISFPPMGSHSQEG 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0067 750 ProSiteProfiles cAMP/cGMP binding motif profile. 360 463 IPR000595 -
Bisa03g0067 750 ProSiteProfiles Ankyrin repeat region circular profile. 634 666 - -
Bisa03g0067 750 Gene3D - 40 286 - -
Bisa03g0067 750 Gene3D - 499 609 IPR036770 -
Bisa03g0067 750 ProSiteProfiles Ankyrin repeat region circular profile. 537 569 - -
Bisa03g0067 750 SMART cnmp_10 360 478 IPR000595 -
Bisa03g0067 750 ProSiteProfiles Ankyrin repeat profile. 634 666 IPR002110 GO:0005515
Bisa03g0067 750 MobiDBLite consensus disorder prediction 723 750 - -
Bisa03g0067 750 SUPERFAMILY cAMP-binding domain-like 288 478 IPR018490 -
Bisa03g0067 750 Gene3D - 610 689 IPR036770 -
Bisa03g0067 750 SUPERFAMILY Ankyrin repeat 509 687 IPR036770 -
Bisa03g0067 750 Gene3D Jelly Rolls 349 475 IPR014710 -
Bisa03g0067 750 SMART ANK_2a 537 566 IPR002110 GO:0005515
Bisa03g0067 750 SMART ANK_2a 667 696 IPR002110 GO:0005515
Bisa03g0067 750 SMART ANK_2a 634 663 IPR002110 GO:0005515
Bisa03g0067 750 SMART ANK_2a 504 533 IPR002110 GO:0005515
Bisa03g0067 750 SMART ANK_2a 570 599 IPR002110 GO:0005515
Bisa03g0067 750 SMART ANK_2a 601 630 IPR002110 GO:0005515
Bisa03g0067 750 SUPERFAMILY Voltage-gated potassium channels 37 285 - -
Bisa03g0067 750 Pfam Ankyrin repeats (3 copies) 511 601 IPR002110 GO:0005515
Bisa03g0067 750 Pfam Ankyrin repeats (3 copies) 612 687 IPR002110 GO:0005515
Bisa03g0067 750 CDD CAP_ED 360 474 IPR000595 -
Bisa03g0067 750 MobiDBLite consensus disorder prediction 1 22 - -
Bisa03g0067 750 ProSiteProfiles Ankyrin repeat profile. 537 569 IPR002110 GO:0005515
Bisa03g0067 750 PRINTS Ankyrin repeat signature 538 553 IPR002110 GO:0005515
Bisa03g0067 750 PRINTS Ankyrin repeat signature 650 664 IPR002110 GO:0005515
Bisa03g0067 750 Pfam Ion transport protein 40 283 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa03g0067 750 ProSiteProfiles Ankyrin repeat region circular profile. 570 601 - -
Bisa03g0067 750 PRINTS EAG/ELK/ERG potassium channel family signature 443 451 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0067 750 PRINTS EAG/ELK/ERG potassium channel family signature 232 249 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0067 750 PRINTS EAG/ELK/ERG potassium channel family signature 276 285 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0067 750 PRINTS EAG/ELK/ERG potassium channel family signature 184 194 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0067 750 PRINTS EAG/ELK/ERG potassium channel family signature 75 85 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa03g0067 750 FunFam Potassium channel SKOR 40 285 - -
Bisa03g0067 750 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515
Bisa03g0067 750 Pfam Cyclic nucleotide-binding domain 380 464 IPR000595 -
Bisa03g0067 750 PANTHER POTASSIUM CHANNEL AKT1 18 704 IPR045319 GO:0005249|GO:0006813
Bisa03g0067 750 Gene3D Helix hairpin bin 288 348 - -
Bisa03g0067 750 FunFam Potassium channel KAT2 348 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0067 Bisa-ChrBisa03 933493 941432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0067 618 750 Ion Channels AT5G37500 27.742 7.49e-07 50.8