Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0058 ATGCCCCAGAATAAGATTTCCTTAGAGCCACCATCCTGGAATCCGATTCCTGATCTCTCCCTTCACATAAGCCTCCCAAACAGTGCTCCTTCCTCAACTTGCACCAACGAAGAAGGGGATACTTGGAGAAGCAGAGACATGGATGGCCTTAAATCATCCCTCAGCGAGAATTCCATCTGCAGAGACAGCAGTAGCACTCAGCTCTCTCTCTCCACTCATCATAATATCCCCACAACCACTGCCTCTGAGGTGGACAGCCCCTGCACCAGATCAACCTTCAACTTCAACTTGGTTTCCAGAGGCAGAGCAGCAGAAGATGGGGTTTCCGTCTCTGAGGGATCATTCAATTTGAGATCCAATATTTCTGCACACCCTCTTCAACTTCCCTATCTTAATTCACCAAATTCTTATGGTCTTGGACTTGGGGGTAACAATCATATTATTGTGGAGCATCCAATCTCCAGGTTTAATGGGATCACCATGGAGGCTCTAAGATCCCACCCACACACCCACCCTCAGTTTCACTACTTCAATCCTCATCACTTGGGTGCTTCTGACCCTTTCTCCAACGGATTTGGGAGGTCGAGCAGCAGGATGTTGCCTGGCAGGCTTCACCAGAGTAAGAGGAACATGAGGGCTCCAAGAATGCGTTGGACTACCTCTCTTCATGCTCGATTTGTTCATGCCGTTGAGCTCCTTGGTGGCCATGAAAGGGCTACCCCCAAGTCGGTTTTGGAGCTGATGGATGTCAAAGATCTAACGCTTGCTCATGTGAAGAGTCATTTGCAGATGTATAGAACTGTTAAGAACACTGACAAACCTGTAGCTTCCTCAGATGGAGATGAAGATTTCATGAGGCTAACGCCACCACTTTGTGAAAATGAGAACTGTTTTTCACCCAGCAAGAGGGGGCCTACAAAAGCATCGTCTCTAGAGCAGGATATGGGCTACGGTACTAGCTCCAACCTGTGGGGTAATTCTTCCAGTAGAGGAGGATGGACACATGGTAGTTCCAGAGATTTGGATGGGATTAGAGGAGCAGATCATATCTTATCATCTCCCCACAGAACTGACAAACCCTCTGAGGGGAGCCATTTTTTACATTCAAGTAGCTTCAAGGAATCTGAGAATCCAAGCCTGGAGTTCACCTTAGGGAGATGA 1161 0.478 MPQNKISLEPPSWNPIPDLSLHISLPNSAPSSTCTNEEGDTWRSRDMDGLKSSLSENSICRDSSSTQLSLSTHHNIPTTTASEVDSPCTRSTFNFNLVSRGRAAEDGVSVSEGSFNLRSNISAHPLQLPYLNSPNSYGLGLGGNNHIIVEHPISRFNGITMEALRSHPHTHPQFHYFNPHHLGASDPFSNGFGRSSSRMLPGRLHQSKRNMRAPRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPVASSDGDEDFMRLTPPLCENENCFSPSKRGPTKASSLEQDMGYGTSSNLWGNSSSRGGWTHGSSRDLDGIRGADHILSSPHRTDKPSEGSHFLHSSSFKESENPSLEFTLGR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0058 386 MobiDBLite consensus disorder prediction 299 335 - -
Bisa03g0058 386 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 17 386 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bisa03g0058 386 MobiDBLite consensus disorder prediction 25 44 - -
Bisa03g0058 386 Gene3D - 213 270 - -
Bisa03g0058 386 SUPERFAMILY Homeodomain-like 211 268 IPR009057 -
Bisa03g0058 386 MobiDBLite consensus disorder prediction 341 363 - -
Bisa03g0058 386 MobiDBLite consensus disorder prediction 295 386 - -
Bisa03g0058 386 Pfam Myb-like DNA-binding domain 215 266 IPR001005 -
Bisa03g0058 386 MobiDBLite consensus disorder prediction 364 378 - -
Bisa03g0058 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 267 IPR006447 GO:0003677
Bisa03g0058 386 FunFam Myb family transcription factor 212 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0058 Bisa-ChrBisa03 828535 835576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0058 193 386 G2-like Transcription Factor Family AT5G16560 50.472 5.52e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa03g0058 Myb_DNA-binding 1.3e-05 CL0123