Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0051 ATGGAAGCAGCAGCAGCAGCAGCAGATCATCACAATAACTCCTCTTGCTCTGTCTACAGAGAGTGCCTCCGCAACCATGCAGCCAGCCTCGGCAGCTACGCCACCGACGGCTGCGGCGAATTCACCCTCGACCACTCCTCCCCCGCCGGCTCCCTCCACTGCGCCGCCTGCGGCTGTCACCGCAACTTCCACCGCAAGCTCTCCTGCCCTCCTCCCCCCCGCGCCCTCCCCTACTCCACCCCTTCCCGCCGCGACCCTCCCGAGCTCTCCGGCGACCTCATGGACTACAGCGGCGGCGAGGGCACCCCCCCGTCGGAGGGCGGCGAGAGGAAGAAGCGGTTCAGGACCAAGTTCAGCGTGGAGCAGAAGGAGAAGATGCTGAGCTTCGCGGAGAAGCTGGGGTGGAAGCTGCAGAGGAAGGATCTCGACGACGAGATCGAGAGATTCTGCAGAGGCGTTGGGGTGACCCGGCAGGTGTTCAAGGTGTGGATGCATAACCATAAGAACTCTTCCTCCTCCTCTTCTGCCTCTACCGGCAATGCCTCCTCTCTCACTCAGTAA 561 0.631 MEAAAAAADHHNNSSCSVYRECLRNHAASLGSYATDGCGEFTLDHSSPAGSLHCAACGCHRNFHRKLSCPPPPRALPYSTPSRRDPPELSGDLMDYSGGEGTPPSEGGERKKRFRTKFSVEQKEKMLSFAEKLGWKLQRKDLDDEIERFCRGVGVTRQVFKVWMHNHKNSSSSSSASTGNASSLTQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0051 186 Pfam ZF-HD protein dimerisation region 18 66 IPR006456 -
Bisa03g0051 186 MobiDBLite consensus disorder prediction 70 113 - -
Bisa03g0051 186 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 19 67 IPR006456 -
Bisa03g0051 186 SUPERFAMILY Homeodomain-like 96 169 IPR009057 -
Bisa03g0051 186 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 170 - -
Bisa03g0051 186 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 19 66 IPR006456 -
Bisa03g0051 186 NCBIfam homeobox domain, ZF-HD class 111 169 IPR006455 -
Bisa03g0051 186 Gene3D - 97 175 - -
Bisa03g0051 186 FunFam Zinc-finger homeodomain protein 2 99 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0051 Bisa-ChrBisa03 745311 745871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0051 19 170 ZF-HD Transcription Factor Family AT4G24660 48.045 4.36e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa03g0051 ZF-HD_dimer 3.6e-22 No_clan