LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g0050	ATGGATGGGGATAATGGTCTCAACATACGTAATTGGGGTTACTATGAACCCACAACGTCTTTTAAGAGCCACCTTGGGCTCCAGCTTATGTCCTCCATGCCTGAAAAACCTCTGCTCGGAGGACGCAATGCTGCAGTTTTATCTAGCACAAATGGTGCATTTCTTCATAGGGACATTGGGATGCCACAAGCAACATATCCTATGGATTACATGAGGGATGCTTGGATCTGTCAGAGAGAGAAGTTTCTGAATATGATACCTGCAAACCCCAATTATGCTGTTATTCCTGAAACATCTTCAGCCCATCATGTGCAAATGATTCAACAACCTGACCCGGTGAAGGAAGAAAGACCAATCGAAGAGCCAGTGGTTGAGAAGACCAATGGCACTAGTAAGAAAAGGCAGGGTCCCAAGGTGCCCAAATCTCCCAAGGCAAAGAAGCCCAAGAGAGGGCCTCGTGTACCAAAGGATGAGAATGCTCCTTCGGTCCAACGAGCAAGGACTGCAAAGAGAACTACTGAAATTGTAATAAATGGAATTGATATGGATATTTCTAGTATTCCTATTCCAGTTTGTTCATGCACTGGGACATCTCAACAGTGTTATAGATGGGGCTCCGGTGGGTGGCAATCTGCATGCTGCACAACAGGCATGTCTATGTATCCCTTACCTATGAGTACCAAGCGGCGTGGTGCAAGGATAGCTGGAAGAAAAATGAGTATAGGAGCTTTTAAGAAAGTCTTAGAGAAACTTGCAGCTGAGGGTTATAACTTCTCTAATCCAATTGATTTGAGAACTTATTGGGCTAAACATGGCACCAACAAGTTTGTCACTATCAGGTAG	843	0.446	MDGDNGLNIRNWGYYEPTTSFKSHLGLQLMSSMPEKPLLGGRNAAVLSSTNGAFLHRDIGMPQATYPMDYMRDAWICQREKFLNMIPANPNYAVIPETSSAHHVQMIQQPDPVKEERPIEEPVVEKTNGTSKKRQGPKVPKSPKAKKPKRGPRVPKDENAPSVQRARTAKRTTEIVINGIDMDISSIPIPVCSCTGTSQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g0050	280	PANTHER	-	1	280	IPR010409	-
	Bisa03g0050	280	Pfam	GAGA binding protein-like family	1	280	IPR010409	-
	Bisa03g0050	280	SMART	GAGA_bind_2	1	280	IPR010409	-
	Bisa03g0050	280	MobiDBLite	consensus disorder prediction	109	132	-	-
	Bisa03g0050	280	MobiDBLite	consensus disorder prediction	102	170	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g0050	Bisa-ChrBisa03	728675	729517	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g0050	1	280	BBR or BPC Transcription factor family	AT2G01930	52.027	4.78e-95	280

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	BBR-BPC	Bisa03g0050		GAGA_bind	7e-112	No_clan