Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0032 ATGGCCAGGTCACCCGCCTCCGCCTGTTTCCCTTGCCGTCTCGCTCAAGAATATAGAAAAAGCAATAACAAGTTGAAAGCTTTTAAATGCCGCCCCGTTCGTACCAAAGCAAGACCCAATTACACGGCGCCAATTCCAACACATAAGTCATGCTTCAAACAGAATTGCCCAGGGAACATGGCGGATTTGGAAAAAGATGAGACGCCAATGCTGTCAGAGACACATAACCAACCATCAGTTGAACATGTGGATTCTAAATTCAAGATGCTGGTATCCAGGACACGAAGTGCATCCATATCTATTCCTATGAGCTCCATGGAGCCATATGAGAGAGAAACTAGTCTTGTGGGACATACTGGTCCACTAAGGAGTGAGAGAAAAACCCCCTTTGTACAGATGAGTGGTCCACTATATGTCACCAACAAACCTGGAAACCTTTTCCGACAGAATGTCCCTGTCACAGGGAACAAAGCAGTGGAGAGTGTGACTGAAAAATTTTCTTCTTTCCATGGCACAGGCGAAAATGATTGGCAGAATGACTATGCTCGCAAAAATGAACACTTACTGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTATTGTACTACATGTCCTACTTACTTCAAGACTTCTCAGCAAAGAAGTCCAAAGGCTCCCGGCATATTTGATCCCAAGTTCCACAATGCTCTTTATGGAGATGCCAAGGGTTGTGCAAGAAGATTTTTTTCTTTTCTGTCTTCATATGTCCCTGGAGTTATGAATCCTCATACTAGAGTTGTACAGCAATGGAACAAATGCTTTGTCATTTCTTGCTTAGTGGCAATTTTTGTGGATCCATTATTTTTCTTATTGCTTTCTGTAGACGAGAACTTCAAATGTATTGTCATCAACAGGACGCTGACAACGGCACTTGTTTTACTTAGAACCATGAATGATTTTGTGTACTTCCTAAACATTCTTCTCCAGTTTAGGCTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCTGGCGAGTTAGTTGACCATCCAAAGAAAATTGCGCTCCATTATTTGCAGGGTTATTTTATTATTGACGTATTTGTTGTGTTTCCCCTTCCTCAGATAATAATACTGTTTGTCCTACCATATCACTTGGGTTCATCAGGAGCAAATTATGCTAAAAATCTTCTGCGCGTAGCAGTCCTTGTTCAGTATATTCCCAGGTTGTGTAGGTTTCTGCCTCTGCTAGTTGGTCAGTCTCCAAGTGGATTCATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTTTGTGCTATCTGGCCATGTTGTTGGGACTTGCTGGTATCTCTTTGGTCTACAGAGGGTTAACCAATGTCTGCGAGATGCCTGCCATGGAATGCCTTATAAAAAAGATTGCATGGAATTGATTGATTGTGGACATGGTCGCAAAGAAACCGATCAGTCATGGTCAAACAGTACTGCTGCTAAAGATTGTTTCTTAAAGGACAGTCAATTTGATTATGGAATCTATTCTACTGCTGTTAACCTTACTACAGAACCTAATGTGATGACTAGATATGTATATTCATTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCAACAACCGAGCTACTTTGTCTGGGAAGTCCTTTTCACAATGGGCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAATATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGTCACTTAGACGCCGAGATGTGGAGCAATGGATGAGCCACCGGCGCTTACCAGAAGAACTAAGAAGGAGAGTACAACTGGCTGAACGATATAATTGGGCTGCAACCAGAGGGGTAAATGAAGAAATGCTTCTGGAGAATTTGCCAGAAGATCTCCAGAGGGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCCTGATGGATGAACCTATCTTAGATGCCATTTGTGAGAGACTAAGACAAAAAACATACATCAAAGGAAGCAATATCTTGTACAAGGGTGGTCTGATAGAGAAAATGGTGTTTGTTGTGCGTGGAAGATTGGAGAGCATTGGAGAGGATGGGACTAAGGTGCCCTTAGCTGAAGGTGATGCTTGTGGCGAAGAACTTCTGACATGGTGTCTTGAGCATTCTTCTGTGAACAAAGATGGCAGAAAAGTAAGGATTCCAGGACAGAGATTGCTCAGCAACAGGACTGTACGCTGCTTAACAAATGTGGAGGCATTTTCGCTCCGATCTGCTGACCTTGAAGAAGTCACCAGCCTTTTTACAAGATTCTTAAGAAATGCACGCGTCCAAGGAGCCATCAGGTATGAATCACCTTATTGGAGAAGCCTTGCAGCAACTCGCATTCAGGTTGCATGGAGATATCGGAAGAAACGTCTAAGTCGTGCTGACACCTCCCAGTCAAATCAATCCTTGACCTTGAGGCCATAG 2493 0.4296 MARSPASACFPCRLAQEYRKSNNKLKAFKCRPVRTKARPNYTAPIPTHKSCFKQNCPGNMADLEKDETPMLSETHNQPSVEHVDSKFKMLVSRTRSASISIPMSSMEPYERETSLVGHTGPLRSERKTPFVQMSGPLYVTNKPGNLFRQNVPVTGNKAVESVTEKFSSFHGTGENDWQNDYARKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRSPKAPGIFDPKFHNALYGDAKGCARRFFSFLSSYVPGVMNPHTRVVQQWNKCFVISCLVAIFVDPLFFLLLSVDENFKCIVINRTLTTALVLLRTMNDFVYFLNILLQFRLAYVAPESRVVGAGELVDHPKKIALHYLQGYFIIDVFVVFPLPQIIILFVLPYHLGSSGANYAKNLLRVAVLVQYIPRLCRFLPLLVGQSPSGFIFESAWANFFINLLTFVLSGHVVGTCWYLFGLQRVNQCLRDACHGMPYKKDCMELIDCGHGRKETDQSWSNSTAAKDCFLKDSQFDYGIYSTAVNLTTEPNVMTRYVYSLFWGFQQISTLAGNQQPSYFVWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEELRRRVQLAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSNILYKGGLIEKMVFVVRGRLESIGEDGTKVPLAEGDACGEELLTWCLEHSSVNKDGRKVRIPGQRLLSNRTVRCLTNVEAFSLRSADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSNQSLTLRP 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0032 830 Gene3D - 266 580 - -
Bisa03g0032 830 CDD CAP_ED 655 771 IPR000595 -
Bisa03g0032 830 SUPERFAMILY Voltage-gated potassium channels 256 584 - -
Bisa03g0032 830 SMART cnmp_10 655 790 IPR000595 -
Bisa03g0032 830 Gene3D Helix hairpin bin 583 647 - -
Bisa03g0032 830 Pfam Ion transport protein 264 583 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa03g0032 830 ProSiteProfiles cAMP/cGMP binding motif profile. 655 723 IPR000595 -
Bisa03g0032 830 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 197 819 - -
Bisa03g0032 830 Gene3D Jelly Rolls 653 777 IPR014710 -
Bisa03g0032 830 SUPERFAMILY cAMP-binding domain-like 583 779 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0032 Bisa-ChrBisa03 525994 537590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0032 64 733 Ion Channels AT3G17700 63.111 0.0 852