Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa03g0027 | ATGGCAGCAGCTAGTGTCGTAGGTGTAGCTTCTGTAACTTTATTACCCATTTCAACTTCTGTCCAAAATAGCACTCAAAGAAGAAGAATTTCTCTAAACAACTCTCAGAGCAACAGTAAATTCCCTTTGTTATCACTCAGGAAATGCGGCTCCTTTGTGTTTGCGTGCCTCCCTCCTCCTCCTTCTGCTTCTCAATCACCCACCTCTTCATCCCATGGAAAACCCAGTTCTTCTTCTTCAACTAAGCTCTACGTCAGTGGGCTATCTTTTCGTACCACCGAGGAGAGCTTGCGAAATGCCTTTCAGAATTTTGGTCCACTTGTGGAAGTCAACCTGGTGATGGATAAAATAGCAAATAGACCAAGAGGGTTTGCTTTTCTTCGTTATGCAACTGAAGAGGATTCCCAAAAGGCTATCAATGGAATGCATGGAAAGTTCTTGGATGGGAGGGTCATATTTGTGGAAGTTGCCAAACCAAGATCTGAGTTACGTCAAAGACGTAAGCAAAATCCTAGATGA | 519 | 0.4335 | MAAASVVGVASVTLLPISTSVQNSTQRRRISLNNSQSNSKFPLLSLRKCGSFVFACLPPPPSASQSPTSSSHGKPSSSSSTKLYVSGLSFRTTEESLRNAFQNFGPLVEVNLVMDKIANRPRGFAFLRYATEEDSQKAINGMHGKFLDGRVIFVEVAKPRSELRQRRKQNPR | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa03g0027 | 172 | Gene3D | - | 20 | 171 | IPR012677 | - | |
Bisa03g0027 | 172 | PANTHER | NUCLEOLAR PROTEIN 8 | 55 | 168 | - | - | |
Bisa03g0027 | 172 | SMART | rrm1_1 | 82 | 155 | IPR000504 | GO:0003723 | |
Bisa03g0027 | 172 | MobiDBLite | consensus disorder prediction | 63 | 82 | - | - | |
Bisa03g0027 | 172 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 83 | 152 | IPR000504 | GO:0003723 | |
Bisa03g0027 | 172 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 81 | 159 | IPR000504 | GO:0003723 | |
Bisa03g0027 | 172 | SUPERFAMILY | RNA-binding domain, RBD | 69 | 170 | IPR035979 | GO:0003676 | |
Bisa03g0027 | 172 | MobiDBLite | consensus disorder prediction | 66 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa03g0027 | Bisa-ChrBisa03 | 441871 | 445054 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa03g0027 | 50 | 160 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 29.730 | 2.58e-10 | 56.2 |