Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0027 ATGGCAGCAGCTAGTGTCGTAGGTGTAGCTTCTGTAACTTTATTACCCATTTCAACTTCTGTCCAAAATAGCACTCAAAGAAGAAGAATTTCTCTAAACAACTCTCAGAGCAACAGTAAATTCCCTTTGTTATCACTCAGGAAATGCGGCTCCTTTGTGTTTGCGTGCCTCCCTCCTCCTCCTTCTGCTTCTCAATCACCCACCTCTTCATCCCATGGAAAACCCAGTTCTTCTTCTTCAACTAAGCTCTACGTCAGTGGGCTATCTTTTCGTACCACCGAGGAGAGCTTGCGAAATGCCTTTCAGAATTTTGGTCCACTTGTGGAAGTCAACCTGGTGATGGATAAAATAGCAAATAGACCAAGAGGGTTTGCTTTTCTTCGTTATGCAACTGAAGAGGATTCCCAAAAGGCTATCAATGGAATGCATGGAAAGTTCTTGGATGGGAGGGTCATATTTGTGGAAGTTGCCAAACCAAGATCTGAGTTACGTCAAAGACGTAAGCAAAATCCTAGATGA 519 0.4335 MAAASVVGVASVTLLPISTSVQNSTQRRRISLNNSQSNSKFPLLSLRKCGSFVFACLPPPPSASQSPTSSSHGKPSSSSSTKLYVSGLSFRTTEESLRNAFQNFGPLVEVNLVMDKIANRPRGFAFLRYATEEDSQKAINGMHGKFLDGRVIFVEVAKPRSELRQRRKQNPR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0027 172 Gene3D - 20 171 IPR012677 -
Bisa03g0027 172 PANTHER NUCLEOLAR PROTEIN 8 55 168 - -
Bisa03g0027 172 SMART rrm1_1 82 155 IPR000504 GO:0003723
Bisa03g0027 172 MobiDBLite consensus disorder prediction 63 82 - -
Bisa03g0027 172 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 83 152 IPR000504 GO:0003723
Bisa03g0027 172 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 81 159 IPR000504 GO:0003723
Bisa03g0027 172 SUPERFAMILY RNA-binding domain, RBD 69 170 IPR035979 GO:0003676
Bisa03g0027 172 MobiDBLite consensus disorder prediction 66 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0027 Bisa-ChrBisa03 441871 445054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0027 50 160 Eukaryotic Initiation Factors Gene Family AT3G11400 29.730 2.58e-10 56.2