Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0023 ATGTGCGAGTGTGGAAAACGCCAATCCATCGACTTTTGTGGCATAATCGAGAATTGGAGGGTGGAGGTGGGCCAATCATGTGACCCGCCCCTCCTCGTTGCACCCGACGAACTCGGTGGGCCCCACTGCCACGATGCATCACCAAATCCATATCATCGTCCACGTGAGATGCCAGCCATTCAAAACCCTCCAAACGAACACCTCATCATCCACGTGGCACGTGCCGGAAACTCAACCTTTACGAGACGAGGACGAGGACGAGGCCGAGCAGTGTTCATCATGGTGAGAAAGAAGAGAGCTGAAGTTCCCGGTGGGGGTGAAAGCTCTGAGACTCAGGGGAGTGGGGGGAGTGGTAGGGGTTCTCAACGCCCTGTTGACCGGAGTGCTCAAGCTCAACAGTTAGGAGGAGGAGGAGGAGGATCCCAAGGAGGTAGAGGTTGGGTTCCCCAAGGAGGGCGTGGGGGTTATGGTGGCGGACGTGGTCGTGGATCCCCCCAACAGCATCATGTTGGACCCCCTGACTATCAAGGTAGGGGGAGGGGAGGACCATTTCAGCAGGGAGGTCGTGGTGGGTATAGCGGTGGCCGGGGTGGTGGGGGCACAACTGGTGGCCGTAGTGGCGGACCTTCATATGGTGTCTCATCCCGACCAGAAGTTCCCGAGCTGCACCAAGCAACCCCAGTCTCATATCACGCTGGGGTGACTCCTCAGTCTGCACTATCTGAGGCCAGTTCTTCTTCTCAACTGCCTGAGACATCACAACTGGAACAGCAAATTGGGCAGATGACAATTCAGTCAGAATCTGCCTCTGTCCCACCAGCCTCAAGTAAATCAGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTAGCTATGGCACCAAATGTATAGTCAAAGCTAACCACTTCTTTGCAGAGTTACCTAACAAAGATCTGCACCAGTATGATGTAACCATTACTCCAGAAGTGACATCAAGAGGTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAGGCTATACCGTGAATCTAGTCTTGGAATGAGACTTCCTGCATATGATGGGCGCAAGAGCCTATACACTGCTGGTCCACTTCCTTTTGTTTCAAGCGAGTTTAGAATCACCCTCGTCGATGAAGATGATGGATCAGGGATGCAAAGGAGAGAGAGGGAATTCAAAGTCGTGATAAAATTGGCTGCAAGGGCTGACCTTCATCACTTGGGACTCTTTTTACAAGGGAGACAAACTGATGCTCCTCAAGAAGCTCTTCAGGTTCTTGATATTGTTCTGCGTGAACTGCCAACTACTAGGTATTGCCCTGTAGGAAGATCATTCTATTCACCTGATCTAGGGAGGAGGCAGCCATTAGGCGAGGGGTTGGAGAGTTGGCGTGGGTTCTATCAAAGTATTCGTCCCACTCAAATGGGATTATCACTCAACATTGATATGTCATCAACCGCATTTATAGAACCATTGCCGGTAATTGATTTTGTAACCCAGCTGCTGAACAGGGATGTCACTGCTCGACCATTATCTGATGCTGATCGTGTAAAGATTAAAAAAGCACTTCGAGGTGTCAAAGTTGAAGTAACACACCGCGGAAACATGAGAAGAAAATATCGTATCTCTGGTCTCACATCACAGGCAACTAGAGAGCTTACATTCCCTGTGGATGAGCGCGGGACAATGAAATCTGTTGTGGAGTATTTTTATGAGACATACGGATTTGTCATTCAACATACTCAGTGGCCTTGTTTACAAGTGGGCAATACAAACAGGCCGAACTATTTACCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTATTCGAAGAGGTTGAATGAGAGGCAGATCACTAATTTGCTTAAAGTCACCTGCCAGCGTCCTGTTGACAGGGAGAGAGATATTATGCAGACGGTTCATCATAATGCTTACCATGAAGATCCCTATGCTCGAGAGTTTGGAATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGCATCCTTCCTGCACCCTGGCTGAAGTATCATGATACAGGTAGAGAAAAGGATTGTTTGCCACAAGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTCAATGGGGGTACTGTTAACAACTGGATCTGCATAAATTTTTCAAGGCATGTTCAAGATAGTGTTGCACGTGGCTTTTGTTATGAACTTGCCCAGATGTGTTATATATCTGGCATGGCATTTAATCCAGAGCCAGTACTTCCTCCGCTCAGTGCCCGCCCAGACCAGGTGGATAAGGTTTTGAAAACACGCTATCATGATGCAAAGACCAAACTGCAGGGAAAGGAGCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGCTCCCTTTATGGTGATCTGAAACGTATATGTGAAACAGATCTTGGGCTTGTTTCCCAGTGCTGTTTGACTAAGCACGTCTTTAAAATGAGCAAGCAGTATCTTGCAAATGTTTCTTTGAAAATCAATGTGAAAGTTGGTGGAAGGAACACAGTGCTTGTAGATGCAATTTCGCGACGCATACCTTTAGTTAGTGACCGTCCCACCATCATTTTTGGAGCCGACGTAACTCATCCACACCCTGGAGAGGATTCTAGTCCATCTATAGCTGCTGTTGTGGCTTCTCAAGATTGGCCTGAAATTACGAAGTATTCTGGTTTGGTTTGTGCTCAAGCTCATCGGCAGGAGCTCATCCAAGACCTTTTCAAACAGTGGCAAGATCCAGCAAGAGGGACGGTAACTGGTGGAATGATCAAGGAGCTTCTCATATCTTTTCGGAGAGCCACCGGGCAGAAGCCACAACGCATCATATTTTACAGGGATGGTGTGAGTGAGGGGCAATTCTATCAAGTTTTACTTTTTGAACTTGATGCTATCCGCAAGGCATGTGCATCTCTTGAACCGAATTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGCCATCACACTAGGCTGTTTGCTCATAACCATCATGATAGGAATTCAGTTGACCGGAGTGGGAATATATTGCCTGGTACTGTTGTAGACTCCAAAATCTGCCATCCAACTGAGTTTGACTTTTATCTTTGTAGCCATGCTGGAATACAGGGCACGAGCCGTCCGGCTCATTACCATGTGTTATGGGATGAAAACAATTTTACTGCTGATGCTCTGCAGACACTGACAAATAACCTTTGCTATACTTATGCAAGATGCACACGATCTGTATCAATTGTTCCCCCGGCATATTATGCTCATCTGGCTGCTTTTCGAGCTCGATTTTATATGGAACCTGCTACATCGGACAGTGAGTCGATGACAAGTGCTGCTGCTGCACGTGGAGCCCCGGGACGTAGCACTCGTGCACCTGGTGCTAGTGCTGCTGTTAGGCCTCTTCCTGCTCTTAAGGAGAATGTGAAGAAGGTTATGTTCTATTGTTAA 3444 0.4756 MCECGKRQSIDFCGIIENWRVEVGQSCDPPLLVAPDELGGPHCHDASPNPYHRPREMPAIQNPPNEHLIIHVARAGNSTFTRRGRGRGRAVFIMVRKKRAEVPGGGESSETQGSGGSGRGSQRPVDRSAQAQQLGGGGGGSQGGRGWVPQGGRGGYGGGRGRGSPQQHHVGPPDYQGRGRGGPFQQGGRGGYSGGRGGGGTTGGRSGGPSYGVSSRPEVPELHQATPVSYHAGVTPQSALSEASSSSQLPETSQLEQQIGQMTIQSESASVPPASSKSVRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESSLGMRLPAYDGRKSLYTAGPLPFVSSEFRITLVDEDDGSGMQRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTARPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYSKRLNERQITNLLKVTCQRPVDRERDIMQTVHHNAYHEDPYAREFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWICINFSRHVQDSVARGFCYELAQMCYISGMAFNPEPVLPPLSARPDQVDKVLKTRYHDAKTKLQGKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVSLKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQAHRQELIQDLFKQWQDPARGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFAHNHHDRNSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMTSAAAARGAPGRSTRAPGASAAVRPLPALKENVKKVMFYC 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0023 1147 ProSiteProfiles PAZ domain profile. 489 603 IPR003100 GO:0005515
Bisa03g0023 1147 Pfam N-terminal domain of argonaute 293 427 IPR032474 -
Bisa03g0023 1147 SUPERFAMILY Ribonuclease H-like 763 1099 IPR012337 -
Bisa03g0023 1147 MobiDBLite consensus disorder prediction 107 137 - -
Bisa03g0023 1147 MobiDBLite consensus disorder prediction 234 275 - -
Bisa03g0023 1147 Pfam Glycine-rich region of argonaut 171 270 IPR024357 -
Bisa03g0023 1147 ProSiteProfiles Piwi domain profile. 777 1098 IPR003165 GO:0003676
Bisa03g0023 1147 MobiDBLite consensus disorder prediction 99 217 - -
Bisa03g0023 1147 Pfam Argonaute linker 2 domain 629 675 IPR032472 -
Bisa03g0023 1147 SMART DUF1785_2 436 488 IPR014811 -
Bisa03g0023 1147 Pfam Mid domain of argonaute 686 761 IPR032473 -
Bisa03g0023 1147 SUPERFAMILY PAZ domain 295 636 IPR036085 GO:0005515
Bisa03g0023 1147 FunFam Protein argonaute-2 482 608 - -
Bisa03g0023 1147 Pfam Argonaute linker 1 domain 437 487 IPR014811 -
Bisa03g0023 1147 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 272 1099 - -
Bisa03g0023 1147 CDD Piwi_ago-like 647 1097 IPR045246 -
Bisa03g0023 1147 Gene3D - 846 1147 IPR036397 GO:0003676
Bisa03g0023 1147 SMART Piwi_a_2 777 1098 IPR003165 GO:0003676
Bisa03g0023 1147 Pfam PAZ domain 493 620 IPR003100 GO:0005515
Bisa03g0023 1147 MobiDBLite consensus disorder prediction 1107 1126 - -
Bisa03g0023 1147 FunFam Argonaute 10 667 840 - -
Bisa03g0023 1147 Pfam Piwi domain 778 1097 IPR003165 GO:0003676
Bisa03g0023 1147 MobiDBLite consensus disorder prediction 39 59 - -
Bisa03g0023 1147 Gene3D - 667 840 - -
Bisa03g0023 1147 MobiDBLite consensus disorder prediction 234 283 - -
Bisa03g0023 1147 Gene3D paz domain 482 607 - -
Bisa03g0023 1147 SMART PAZ_2_a_3 493 625 IPR003100 GO:0005515
Bisa03g0023 1147 FunFam protein argonaute 10-like 846 1147 - -
Bisa03g0023 1147 CDD PAZ_argonaute_like 488 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0023 Bisa-ChrBisa03 351615 359220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0023 174 1147 Eukaryotic Initiation Factors Gene Family AT1G48410 81.587 0.0 1623