Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0017 ATGGTGCGTTGGATATATGTAGTCCACAGCTTCATCGATAGCCACCAGTCTGCTCCTTCCTTGACACCACCAAGACCTCCCACTCACTCCTTAAGTGCTTCTTCCTCCACCTCCTTTTCACATGCCATTAGTATGTCCTGCCGCTCTTTCACTACTCCCTCTCCAACCTCTTCTCTGATCTTGACGACTAAATCTCAGTCCACTGCAAAGCCAGGCAAGACGCAACGTTGGCTTATCCCTAGACGGGCTTCCAACGGTCCTGCTTCTCTCTCTCTCTCCCCCATCCTTCCTTTCCCTCTCACTCAACGGTTACGGGCTTCTAATTGTTTGAAAATGGCTGATGGTCATGAGACTGATAAGAACATTGAGGTATGGAAAATCAAGAAATTGATCAAAGCTCTCGAGGCTGCTAGAGGAAATGGGACGAGTATGATTTCCCTTATCATGCCCCCACGTGATCAAATCTCTCGTGTTACCAAGATGCTTGGTGATGAGTTTGGAACTGCTTCAAACATAAAAAGCAGGGTGAATAGACAGTCTGTGCTTGGTGCAATCACTTCTGCCCAGCAGAGGCTTAAGCTTTACAACAAGGTTCCTCCAAACGGGCTTGTTCTATATACTGGGACAATCGTAACCGAAGACGGGAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGGCCTATCAATGCATCTCTCTACCTTTGTGACAACAAGTTTCATACAGAAGCTCTAAATGAGCTGCTAGAGTCTGATGACAAGTTTGGTTTTATAGTTATGGATGGCAATGGTACTCTTTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTCCCAAAGAAACATGGTAGAGGGGGACAATCAGCTCTACGGTTTGCTCGTCTACGCATGGAGAAGCGTCACAACTACGTGAGGAAGACTGCAGAGCTTGCAACACAGTTCTACATAAATCCTGCTACCAGTCAGCCTAATGTATCTGGTTTAATTCTGGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTGCGGCAAAAATACTTAATGTTGTGGATGTATCTTACGGAGGGGAGAATGGCTTCAATCAGGCTATTGAACTATCCGCAGAGATTCTTTCAAGTGTGAAGTTTATCCAGGAGAAACGCCTGATTGGAAAATATTTTGAGGAAATTAGCCAGGATACAGGAAAGTACGTTTTTGGGGTTGATGACACTTTAAAAGCCCTGGAGATGGGTGCTGTTGAGATACTTATTGTCTGGGAAAATTTGGATATGAATAGGTTTGTCTTAAAACATAGCACTACTGGTGAGCTTGTTATCAAGCATTTTAACAAAGAGCAGGAGGCCAACCAGAACAATTTTCGGGATCCTGCCTCTTCTTCTGAATATGAGGTTCAGGAAAAAATGTCTCTGCTGGAGTGGTTTGCAAATGAGTACAAACGGTTTGGTTGCACTCTCGAGTTTGTCACCAATAAATCACAAGAGGGTTCACAGTTTTGCAGGGGTTTTGGCGGGGTGGGGGGGATGTTGCGGTACCAGCTTGATATGAGGTCATTTGATGATTTTTCTGATGATGGAGAAGTGTATGATGATGATGAATAG 1647 0.4426 MVRWIYVVHSFIDSHQSAPSLTPPRPPTHSLSASSSTSFSHAISMSCRSFTTPSPTSSLILTTKSQSTAKPGKTQRWLIPRRASNGPASLSLSPILPFPLTQRLRASNCLKMADGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILSSVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDMNRFVLKHSTTGELVIKHFNKEQEANQNNFRDPASSSEYEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGVGGMLRYQLDMRSFDDFSDDGEVYDDDE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0017 548 SUPERFAMILY L30e-like 390 531 IPR029064 -
Bisa03g0017 548 Pfam eRF1 domain 1 129 249 IPR005140 -
Bisa03g0017 548 Pfam eRF1 domain 3 392 529 IPR005142 -
Bisa03g0017 548 Gene3D - 390 548 IPR029064 -
Bisa03g0017 548 Gene3D eRF1 domain 1 110 246 IPR024049 -
Bisa03g0017 548 Pfam eRF1 domain 2 255 388 IPR005141 -
Bisa03g0017 548 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 115 540 IPR004403 GO:0003747|GO:0006415
Bisa03g0017 548 Gene3D eRF1 domain 2 247 388 IPR042226 -
Bisa03g0017 548 FunFam Eukaryotic peptide chain release factor subunit 1 247 388 - -
Bisa03g0017 548 SUPERFAMILY Translational machinery components 253 387 - -
Bisa03g0017 548 MobiDBLite consensus disorder prediction 15 34 - -
Bisa03g0017 548 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 117 251 IPR024049 -
Bisa03g0017 548 FunFam Eukaryotic peptide chain release factor subunit 1 113 246 - -
Bisa03g0017 548 FunFam Peptide chain release factor subunit 1 390 548 - -
Bisa03g0017 548 NCBIfam peptide chain release factor aRF-1 124 528 IPR004403 GO:0003747|GO:0006415
Bisa03g0017 548 SMART eRF1_1_2 115 251 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0017 Bisa-ChrBisa03 307034 311478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0017 112 548 Eukaryotic Initiation Factors Gene Family AT3G26618 88.558 0.0 811