Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g0009 ATGGGAAAAACTCTTACCTTGGAAGTTGAGAGTTCAAATACTATTGACAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAACCCCCCTTGATCAGCAAAGGTTGATAGTTGCTGGGAAACAATTGGAGGACGGAAGAACTTTGGCAGATTACAATAGTCAGAAAGAGTCTACTCTTCACCTTTTTCGAAGTCCAAATACAAGACGAGGCAATTCACTACCAGTTAGTAACTACAACAAGAAATGGGATGAAGAGTTTGGTAAGCGATGGTTAATGCCGAATGTTCAGGGACTTGGGAGAATGGGAACAGGATCAACAATAAGATGCCCAAAAAGAAAAATAAAGTTCAATTATAATGCACTAAAGGTCTCCCTAAGGATGTTGAACACTGGTGGCAGTCAGCTGAAATAG 411 0.4088 MGKTLTLEVESSNTIDNVKAKIQDKEGTPLDQQRLIVAGKQLEDGRTLADYNSQKESTLHLFRSPNTRRGNSLPVSNYNKKWDEEFGKRWLMPNVQGLGRMGTGSTIRCPKRKIKFNYNALKVSLRMLNTGGSQLK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g0009 136 PRINTS Ubiquitin signature 45 66 IPR019956 -
Bisa03g0009 136 PRINTS Ubiquitin signature 3 23 IPR019956 -
Bisa03g0009 136 PRINTS Ubiquitin signature 24 44 IPR019956 -
Bisa03g0009 136 PANTHER UBIQUITIN 2 65 - -
Bisa03g0009 136 Gene3D - 1 64 - -
Bisa03g0009 136 SMART ubq_7 1 64 IPR000626 GO:0005515
Bisa03g0009 136 FunFam Polyubiquitin-C 1 67 - -
Bisa03g0009 136 ProSiteProfiles Ubiquitin domain profile. 1 61 IPR000626 GO:0005515
Bisa03g0009 136 Pfam Ubiquitin family 2 64 IPR000626 GO:0005515
Bisa03g0009 136 SUPERFAMILY Ubiquitin-like 2 64 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g0009 Bisa-ChrBisa03 181486 183141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g0009 2 62 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 88.525 5.70e-33 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0009 03 181486 183141 Bisa03g0009 03 181486 183141 ECH