LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g4007	ATGAAACTCCTTCCCTCTCTTTCTCCACCTCTCTCATACTTGTACCTCAATTTGTTCATGCAAGATCCAGATAACCACCACTCTAACACAAGGAAGCCCTGGTATTTGAGAGCAATGGGGATGGGGATGGGGTCTCTATGGAAAAGTGTTTCCAAATCTACAGAGATCCCCACTTCCAATGCCGGTGTTTGGAAGACAGTCCCCAAATCTCCTCGATCACCTCCTTCTTCCAATAAGCCAAAGCAGCATCTAAGAAAATGCACGTCTCTCAAGGTGGCCACGTCCTTCACCAGAGTATGCCTCTGCGCTCCCATCTCTTCCTACAACGAGGTGTTCAGAGCGGAGGTTCCGCCTAGAAGAAGCAACAGTTTTCCCAGACCCAAACTATTGCACGCTCAGGAAATGAGAATCGCTAGCGCTAGGGTTAGCACAGAGGGAAGAAGAGTATTCCGGGGGAAATCATTGACCGATGATGTCCTCATGAGGAGGTTTGTGATTGAAGAAGAAGCGATGATGCAAGTTAGGAGAAGAAATCAGATGGAAGTTATTCGGAGGAGGAGTACGGAGCGGAGAAACAAGCTCGGCCCTAGTCCTCTTTGTAGAATGCGTGAGTTTTACGGGGTTTTGAAGGAGCGTGGGTGGGGACTGGGGAGCATTAGGAGAATCTACAATCTACATCGTACACGATGCTGCCTCTTGTGTGGTTTTGTTGCGCTACCCAGGCTGCTGGGATCAGAGATTGACTCTAATAGTTGATGCTGCCTCCTTCTTCGCGATCCTCCTGGAAGAAACAGTAATGCTACTGACATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCATTCACCACTCCAAGGAGAAGGTAGTCAATGATTCTGAAAAGAAAAACACAAAAGAAAAGAAAAAGAAAGGTCTTGGGAAACTAAGGCATGGAGAGACAAATTCATTTATACCCCTCTTCAGAGAGCCCAGCAGCATTGAAAAAATCTTCGGGGATTTTGAAAGGGATCAACAACTGCTAACTTTCAGGCCTCCCACACCTCCTGAACTACCCAAAACACCGCCTTTTGTGCCTCCTAGAGCTGCTTCTCCTAGGGCTCCTTCTCCAAGAACTGCTTCTCCGAGGGCTCCTTCACCACGGGTTGCTTCTCCCAGAGCTGCATCTCCCAGGATTGTTCATCACCACAGACCAGAACCAACATTAAGGAACCACCATGCGTCGGCAACTAAGATCCAGGCTGCTTATAGAGGTTATATGGCTAGGAGGAGTTTCAGAGCTCTGAAGGGTCTGGTGAGGCTTCAAGGGGTGGTAAGAGGACAAAATGTGAAGAGGCAGACAATGAATGCCATGAAATACATGCAGCTGCTGGTGCGGGTTCAATCTCAGATTCAATCTCGGAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAATACAAGAATGATAATGAAGTGGCAAGTAACTTGGGCAAGTTGACTTTAGCTTCTGAGGCAGGTAATGAAGATTGGGATGATAGCTTACTGACAAAGGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATATGCGTACTCCCATCAGTTGTGGAAAGCCACTCCTACATCAACTCAAACGCCACTGTCAGATGTGCGATCTGGGGGATTCCCATGGTGGTGGAACTGGTTGGAACGACAGTTGCCCTCGGCAAATCCACAAGAAAGCCAGGTGTTGAAAAATTTTCAACTTACACCTCCTAGACCATACTCTGAGCAGAAGACTAGTCCACGACCCACCTCAAGCACCCATAAGCAGCCCCATTATGGGTTTGATAATACGGATACAGCCACGCCAAAATCGATCAGGTCAGCTATAGTGTCATCTGCAAAACCAGCAAGGACCCCTCTCCATAGGACTCCACAAGCAAACAGCTCAAGCTTGCCAAAGTATTCGAGAGCAAGGATGGGGACGTTTGATGTACCACTCAAGGATGATGATAGCCTCACAAGCTGCCCACCATTTTCAGTGCCAAACTACATGGCTCCAACCGTTTCTGCCAAGGCCAAAGTACGTGGTAGCAGTAATCCAAGAGAGAGTTTACCGGGGACTCCAAGCAGTGAATCAAAAAGGCGACTTTCGTTTCCTCTGACACAAGGGATTGGATCTTTTAAATGGACAAAAGGGTCCTTGTTCTCAAGCAAGGATCCCAGGTCCCAAAGGATGTTAGATAAAAACCAGTCAGTTCAATCTTTAGGAAACATGAGTGTGGATTCAACGGTGTCTTTACCCGCAGGGGTTGGAAGAAAGCCGTTTAACAGATTTGTGTGA	2355	0.4752	MKLLPSLSPPLSYLYLNLFMQDPDNHHSNTRKPWYLRAMGMGMGSLWKSVSKSTEIPTSNAGVWKTVPKSPRSPPSSNKPKQHLRKCTSLKVATSFTRVCLCAPISSYNEVFRAEVPPRRSNSFPRPKLLHAQEMRIASARVSTEGRRVFRGKSLTDDVLMRRFVIEEEAMMQVRRRNQMEVIRRRSTERRNKLGPSPLCRMREFYGVLKERGWGLGSIRRIYNLHRTRCCLLCGFVALPRLLGSEIDSNSXCCLLLRDPPGRNSNATDMGKKGSWFSAIKRVFIHHSKEKVVNDSEKKNTKEKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFERDQQLLTFRPPTPPELPKTPPFVPPRAASPRAPSPRTASPRAPSPRVASPRAASPRIVHHHRPEPTLRNHHASATKIQAAYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTMNAMKYMQLLVRVQSQIQSRRIQMLENQARYQAEYKNDNEVASNLGKLTLASEAGNEDWDDSLLTKEEIEARLQRKVEAIIKRERAMAYAYSHQLWKATPTSTQTPLSDVRSGGFPWWWNWLERQLPSANPQESQVLKNFQLTPPRPYSEQKTSPRPTSSTHKQPHYGFDNTDTATPKSIRSAIVSSAKPARTPLHRTPQANSSSLPKYSRARMGTFDVPLKDDDSLTSCPPFSVPNYMAPTVSAKAKVRGSSNPRESLPGTPSSESKRRLSFPLTQGIGSFKWTKGSLFSSKDPRSQRMLDKNQSVQSLGNMSVDSTVSLPAGVGRKPFNRFV	784

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	60	83	-	-
	Bisa02g4007	784	ProSiteProfiles	IQ motif profile.	408	436	IPR000048	GO:0005515
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	580	633	-	-
	Bisa02g4007	784	Pfam	IQ calmodulin-binding motif	409	429	IPR000048	GO:0005515
	Bisa02g4007	784	Pfam	Protein of unknown function (DUF4005)	657	730	IPR025064	-
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	341	400	-	-
	Bisa02g4007	784	PANTHER	SERINE/THREONINE-KINASE	15	202	-	-
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	698	719	-	-
	Bisa02g4007	784	Gene3D	-	406	460	-	-
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	580	659	-	-
	Bisa02g4007	784	SMART	iq_5	407	429	IPR000048	GO:0005515
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	291	312	-	-
	Bisa02g4007	784	MobiDBLite	consensus disorder prediction	348	378	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g4007	Bisa-ChrBisa02	94463062	94472927	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g4007	270	784	IQD Protein Family	AT3G59690	53.047	2.70e-165	486