Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g4001 ATGACAGCCAGCTCTTTCTGCAATGCTGACTCTGTGTTTTCGAGAGAAGAGGGCGTAGATATTAGAAAGATGATGGAACAGAAAAGGAGCCTCTGCTCTGTGGATCAAAGCAATTATACCTCTATTGCATCTAAAAGACATAAGGCTGATCTATCTATCTCCACAAAGGAGAGAAAGGAGAAGATTGGGGAACGAATCGTTGCCCTGCAGCAGCTTGTTTCACCATTTGGGAGGTCAGATACAGCTTCTGTCCTTAAAGAGGCAATGCACTACATAGAGTTCCTTCATAAACAAGTTAAGGTGCTCAGTGCTCCTTATCTCCAATGCTCTTCGACAACCAAAACGCAGGACCTGGATCCGTACAGCCTGAGGAATAGAGGATTATGTCTTGTTCCGGTGTCATATACGATTGGAGTTGCTCACAGCAATGGTGCAGATATATGGGCTCCGATCAAGACCACTTCGCCAAATTATGACTAG 480 0.4479 MTASSFCNADSVFSREEGVDIRKMMEQKRSLCSVDQSNYTSIASKRHKADLSISTKERKEKIGERIVALQQLVSPFGRSDTASVLKEAMHYIEFLHKQVKVLSAPYLQCSSTTKTQDLDPYSLRNRGLCLVPVSYTIGVAHSNGADIWAPIKTTSPNYD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g4001 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Bisa02g4001 159 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 136 - -
Bisa02g4001 159 Gene3D - 42 117 IPR036638 GO:0046983
Bisa02g4001 159 FunFam Transcription factor bHLH113 family 45 121 - -
Bisa02g4001 159 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Bisa02g4001 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 110 IPR036638 GO:0046983
Bisa02g4001 159 SMART finulus 52 101 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g4001 Bisa-ChrBisa02 94381519 94384915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g4001 24 158 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 56.329 4.70e-57 174